Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31179
         (479 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979...    30   0.85 
02_05_0980 - 33271879-33271934,33272031-33272100,33272194-332723...    30   1.1  
08_02_0724 + 20439312-20439523,20441282-20441345                       29   2.6  
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...    28   4.5  

>08_02_1547 + 27795664-27795674,27795743-27795892,27796182-27797906,
            27799447-27799546,27799657-27800268,27800399-27800521,
            27800905-27801039,27801108-27801209,27801716-27801778,
            27801854-27802045,27802121-27802258,27802632-27802694,
            27803068-27803466
          Length = 1270

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 31   LPATISSLLHGSVLPMDWVKSLSFPGTRLFELATSRLSTPFTIHLPKE 174
            +P TIS L H    P+ W+ + S PG    E    + +  FT+  P+E
Sbjct: 1140 VPTTISPLDHDGK-PLSWLATTSGPGLYRREANRRQSALDFTVRTPRE 1186


>02_05_0980 -
           33271879-33271934,33272031-33272100,33272194-33272355,
           33272787-33272895,33273350-33273608,33274193-33274272,
           33274370-33274499,33274676-33274793,33275222-33275302,
           33275510-33275827,33277490-33277741
          Length = 544

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 22/58 (37%), Positives = 28/58 (48%)
 Frame = +1

Query: 175 AMTTSCTARKNYEEIRFLDIYEKTFFQYLXQGHFKAFDKEIDLHSSKAVNFVGNYWQT 348
           A   S TARK Y E+      E    + L  GH K  DKEI   + K + F+G Y +T
Sbjct: 367 ACNISTTARKEYSEVSGGQDGE-LISRLLSFGHCK--DKEIAAKTVKTIKFLGLYEET 421


>08_02_0724 + 20439312-20439523,20441282-20441345
          Length = 91

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 76  MDWVKSLSFPGTRLFELATSRLSTPFTIHLPKEAMTTSCTARKNYEEIR 222
           M WV+ +  P T     +  R S P  +HLP  +  +S +   + E I+
Sbjct: 1   MRWVQEMDSPTTSYSTTSAVRRSNPTEVHLPTRSKPSSSSTTWSIEIIQ 49


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 140 RREVASSKRRVPGKLRDFTQSIGKTLPCSNELIV 39
           +R V   + +VP  L  FT+++ K L C  E ++
Sbjct: 60  QRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLL 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,913,614
Number of Sequences: 37544
Number of extensions: 220294
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)