Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31179
         (479 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g32660.1 68415.m03992 disease resistance family protein / LRR...    30   0.93 
At1g49120.1 68414.m05507 AP2 domain-containing transcription fac...    30   0.93 
At5g66820.1 68418.m08425 expressed protein                             28   2.8  
At2g43760.1 68415.m05440 molybdopterin biosynthesis MoaE family ...    28   2.8  
At5g49850.1 68418.m06173 jacalin lectin family protein similar t...    28   3.7  
At2g21500.2 68415.m02559 expressed protein                             28   3.7  
At2g21500.1 68415.m02558 expressed protein                             28   3.7  
At4g17300.1 68417.m02598 asparaginyl-tRNA synthetase, chloroplas...    27   5.0  
At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS cla...    27   5.0  
At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS cla...    27   5.0  

>At2g32660.1 68415.m03992 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4
           [Lycopersicon hirsutum] gi|2808683|emb|CAA05268
          Length = 589

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 46  SSLLHGSVLPMDWVKSLSFPGTRLFELATSRLSTPFTIHLPKEAMTT-SCTARKNYEEIR 222
           S+  HG + P D   SL+FP  ++ E++ +R    FT  LP       S  + K Y+E R
Sbjct: 319 SNSFHGPMSPPDDQSSLAFPKLQILEISHNR----FTGSLPTNYFANWSVKSLKMYDEER 374

Query: 223 -FLDIYEKTFFQY 258
            ++  Y    F Y
Sbjct: 375 LYMGDYSSDRFVY 387


>At1g49120.1 68414.m05507 AP2 domain-containing transcription
           factor, putative similar to ethylene-responsive element
           binding factor GI:8809573 from [Nicotiana sylvestris]
          Length = 329

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +1

Query: 205 NYEEIRFLDIYEKTFFQYLXQ---GHFKAFDKEIDLHSSKAVNFVGNYWQTNADLFEEDL 375
           +Y  + F+ I +   F ++     G  K F  +I  H+   VN       TN DLF +DL
Sbjct: 227 DYNSVEFISIVDDFKFDFVENDRVGKEKTFGFKIGDHTK--VNQHAKIVSTNGDLFVDDL 284

Query: 376 LQF 384
           L F
Sbjct: 285 LDF 287


>At5g66820.1 68418.m08425 expressed protein 
          Length = 519

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 115 LFELATSRLSTPFTIHLPKEAMTTSCTARKNYEEIRFLDI 234
           L  L +   S PF +  PKE+ ++S   RKN   + +L +
Sbjct: 98  LSALGSENRSDPFVLACPKESRSSSALIRKNLSGVVWLSL 137


>At2g43760.1 68415.m05440 molybdopterin biosynthesis MoaE family
           protein contains Pfam profile: PF02391 molybdopterin
           converting factor, subunit 2
          Length = 198

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 238 EKTFFQYLXQGHFKAFDKEIDLHSSKAVNFVGNYWQTNADLFE-EDLLQFYQRSYEVNAR 414
           EK   + L +GH     K ID  S+     +  +  T  D+FE + +L+    +Y   A 
Sbjct: 5   EKNLIEILEEGHKVDVVKYIDYVSAPQAGAIATFSGTTRDMFEGKTVLELRYEAYVPMAT 64

Query: 415 RVLGA 429
           R L +
Sbjct: 65  RCLSS 69


>At5g49850.1 68418.m06173 jacalin lectin family protein similar to
           myrosinase-binding protein homolog [Arabidopsis
           thaliana] GI:2997767; contains Pfam profile PF01419
           jacalin-like lectin domain
          Length = 596

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 72  TNGLGKIPEFSWYSPLRTGYLPPFNSFYYP 161
           + G   +    WY+PL  GY+    + +YP
Sbjct: 410 SKGCAVVGFHGWYAPLGAGYITALGAHFYP 439


>At2g21500.2 68415.m02559 expressed protein
          Length = 421

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +3

Query: 84  GKIPEFSWYSPLRTGYLPPFNSFYYPFAQRSNDY----ELHSEEELRR 215
           GK P+    S LR+    PF + ++ F  RSN      E+HS   LR+
Sbjct: 363 GKTPKLISSSSLRSYSPKPFLARHFSFGSRSNSVKSPKEIHSPSSLRK 410


>At2g21500.1 68415.m02558 expressed protein
          Length = 421

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +3

Query: 84  GKIPEFSWYSPLRTGYLPPFNSFYYPFAQRSNDY----ELHSEEELRR 215
           GK P+    S LR+    PF + ++ F  RSN      E+HS   LR+
Sbjct: 363 GKTPKLISSSSLRSYSPKPFLARHFSFGSRSNSVKSPKEIHSPSSLRK 410


>At4g17300.1 68417.m02598 asparaginyl-tRNA synthetase, chloroplast,
           mitochondrial / asparagine-tRNA ligase / AsnRS (SYNO)
           nearly identical to SP|O48593
          Length = 567

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 93  PEFSWYSPLRTGYLPPFNSF 152
           P +S + PLR   LPPF++F
Sbjct: 30  PSYSLFRPLRRRVLPPFDAF 49


>At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 271 HFKAFDKEIDLHSSKAVNFVG 333
           H KA +K++DL+S+K++  VG
Sbjct: 191 HMKALNKKLDLNSNKSLRVVG 211


>At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 271 HFKAFDKEIDLHSSKAVNFVG 333
           H KA +K++DL+S+K++  VG
Sbjct: 191 HMKALNKKLDLNSNKSLRVVG 211


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,380,587
Number of Sequences: 28952
Number of extensions: 173476
Number of successful extensions: 559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)