Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31169
         (607 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22NE8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_Q3EZB7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_UPI0000DD83DE Cluster: PREDICTED: hypothetical protein;...    33   6.9  

>UniRef50_Q22NE8 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1161

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +3

Query: 429  NCVP*TCVLYCFVLYCNQNDLINVDRHYFKRLK*IRMFLNCVF-LTSLIFFFNNESL 596
            NC+     LY F LY NQN L+  D      +K IR  L+ V  LT+L F+FN  ++
Sbjct: 1085 NCISSLNQLYNFTLYFNQNKLLEED------MKVIRSGLSKVLNLTNLTFYFNGNNI 1135


>UniRef50_Q3EZB7 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar israelensis ATCC
           35646|Rep: Putative uncharacterized protein - Bacillus
           thuringiensis serovar israelensis ATCC 35646
          Length = 524

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +3

Query: 201 SIRHSLNIPGSSI*TAGYKSRVRRATNDAATCPPVPEDII*MLIYLRQRYGLT 359
           SIRH  N  G+ +  A +  +  +    +  CP  P+  +  L Y ++RYG +
Sbjct: 199 SIRHFFNFGGTEVYAAKFAIKDIKKKRLSVVCPITPKSTLVRLFYFKKRYGFS 251


>UniRef50_UPI0000DD83DE Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 309

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
 Frame = +3

Query: 147 KAFLSSAVCKV-----LFSVRTYSIRHSLNIPGSSI*TAGYKSRVRRATNDAATCPPVPE 311
           + FLSSAV         F+  T SIR   N PGS     G++ R R + + AA  PP   
Sbjct: 51  RRFLSSAVSSTSIPANFFTDSTISIREKQN-PGSLRQKGGWRRRSRESCSGAAGAPPASA 109

Query: 312 DII*MLIYLRQRYG 353
           D    L+ L Q  G
Sbjct: 110 DQRRRLLGLAQTRG 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,180,338
Number of Sequences: 1657284
Number of extensions: 7131101
Number of successful extensions: 16828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16828
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)