Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31169
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   6.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 251 LQITGSESHKRRRHVSPSTRGHNLNANIS 337
           L I  +E H   R + P  R   LN N+S
Sbjct: 326 LYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 251 LQITGSESHKRRRHVSPSTRGHNLNANIS 337
           L I  +E H   R + P  R   LN N+S
Sbjct: 326 LYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 480 QNDLINVDRHYFKRLK*IRMFLNCVFLTSLIFF 578
           Q+D + +D    K    I +F+ CVFL     F
Sbjct: 761 QSDRLMIDYKTQKTGSKIHLFVKCVFLMGYQIF 793


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 560 QKNTIEKHPYLFKSLKIMAV 501
           +K + EK PY + +L +MA+
Sbjct: 77  EKKSKEKPPYSYNALIMMAI 96


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 285 AATCPPVPED 314
           AA CPP P+D
Sbjct: 93  AANCPPSPKD 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,732
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)