Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31169
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.       28   4.5  

>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical protein
            ZK1193.2 protein.
          Length = 1250

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
 Frame = +1

Query: 148  RHFCLQQFVKSY-FQYVRTLYVTH*TS---QVHPFRRLVTNHGFGE--PQTTP 288
            R  C   F+  Y FQ  R  +V        + HPFRR  T H  GE  PQ TP
Sbjct: 978  RDGCAYPFISEYTFQCYRNQFVVALDGLDFEGHPFRRTFTVHCDGEIRPQPTP 1030


>Z47809-8|CAH10845.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281 RRRHVSPSTRGHNLNANISTSTIRFD 358
           R R+ SPS + HNL+   STS   FD
Sbjct: 896 RARNASPSAQPHNLSVAKSTSLASFD 921


>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical protein
            C06C3.1c protein.
          Length = 1124

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 1052 RARNASPSAQPHNLSVAKSTSLASFD 1077


>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical protein
            C06C3.1b protein.
          Length = 1019

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 947  RARNASPSAQPHNLSVAKSTSLASFD 972


>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical protein
            C06C3.1a protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 944  RARNASPSAQPHNLSVAKSTSLASFD 969


>Z36719-11|CAH04695.1|  968|Caenorhabditis elegans Hypothetical
           protein C06C3.1d protein.
          Length = 968

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281 RRRHVSPSTRGHNLNANISTSTIRFD 358
           R R+ SPS + HNL+   STS   FD
Sbjct: 896 RARNASPSAQPHNLSVAKSTSLASFD 921


>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
            protein C06C3.1c protein.
          Length = 1124

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 1052 RARNASPSAQPHNLSVAKSTSLASFD 1077


>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical protein
            C06C3.1b protein.
          Length = 1019

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 947  RARNASPSAQPHNLSVAKSTSLASFD 972


>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical protein
            C06C3.1a protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 944  RARNASPSAQPHNLSVAKSTSLASFD 969


>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 281  RRRHVSPSTRGHNLNANISTSTIRFD 358
            R R+ SPS + HNL+   STS   FD
Sbjct: 944  RARNASPSAQPHNLSVAKSTSLASFD 969


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,601,145
Number of Sequences: 27780
Number of extensions: 175406
Number of successful extensions: 417
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)