Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31167
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110477-2|CAB54338.1|  319|Caenorhabditis elegans Hypothetical ...    34   0.082
Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical p...    33   0.14 
Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U40415-1|AAK39255.4|  445|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL132863-2|CAB60569.1|  317|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical ...    28   7.1  
AF003151-21|AAK18914.2|  259|Caenorhabditis elegans Hypothetical...    27   9.4  

>AL110477-2|CAB54338.1|  319|Caenorhabditis elegans Hypothetical
           protein Y113G7B.3 protein.
          Length = 319

 Score = 34.3 bits (75), Expect = 0.082
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +1

Query: 259 KVYNDDFDASLVLDYYKYIVVVSEYLKIHDYCKGFEVILDYSDV--NVMNFVTKFNPVIL 432
           K+  D+F  S   DY   I ++ E   + D  +  +VILD  +   +  + ++ F P IL
Sbjct: 124 KLRLDEFKLSAGWDYMMTINLLKEIKDVEDMFQAKKVILDVFEFCRDAFSILSHFEPGIL 183

Query: 433 RQAGTLITDGYG 468
            + G   +D YG
Sbjct: 184 EEIGIFCSDVYG 195


>Z74041-4|CAD56597.1|  394|Caenorhabditis elegans Hypothetical
           protein T03F7.7b protein.
          Length = 394

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 19/93 (20%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +1

Query: 370 ILDYSDVNVMNFVTKFN-PVILRQAGTLI-TDGYGMRIKGVYII*PSKTVDLILNLFKQV 543
           ILD   +N+M+F+   + P  L +    +  + +   +  + +I P   + ++  + K++
Sbjct: 160 ILDLKGLNLMDFMNPLSGPAQLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRL 219

Query: 544 VSTKLASRLHVHKTIDTGTEFLDKDLLPIEYGG 642
           V      +L     ++   ++L+ + +P+EYGG
Sbjct: 220 VDPNTVEKLAFLSNVEDLKKYLEPEAIPVEYGG 252


>Z74041-3|CAA98522.1|  368|Caenorhabditis elegans Hypothetical
           protein T03F7.7a protein.
          Length = 368

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 19/93 (20%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +1

Query: 370 ILDYSDVNVMNFVTKFN-PVILRQAGTLI-TDGYGMRIKGVYII*PSKTVDLILNLFKQV 543
           ILD   +N+M+F+   + P  L +    +  + +   +  + +I P   + ++  + K++
Sbjct: 160 ILDLKGLNLMDFMNPLSGPAQLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRL 219

Query: 544 VSTKLASRLHVHKTIDTGTEFLDKDLLPIEYGG 642
           V      +L     ++   ++L+ + +P+EYGG
Sbjct: 220 VDPNTVEKLAFLSNVEDLKKYLEPEAIPVEYGG 252


>Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical
           protein W02B12.8a protein.
          Length = 444

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +1

Query: 430 LRQAGTLITDGYGMRIKGVYII*PSKTVDLILNLFKQVVSTKLASRLHVHKTID 591
           L QA   +   +   +K +Y++ P++ + +I +LFK  +S+K  ++ H    ID
Sbjct: 150 LFQAYKQLDRRFKKNLKALYVVHPTRFIRIIFSLFKGFISSKFENKFHYVMCID 203


>Z46996-9|CAA87097.2|  400|Caenorhabditis elegans Hypothetical
           protein C34C12.6 protein.
          Length = 400

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
 Frame = +1

Query: 361 FEVILDYSDVNVMNFVTKFNPVI-LRQAGT-LITDGYGMRIKGVYII*PSKTVDLILNLF 534
           F VI D + VN+ ++V   +  + L Q  + L  D +   ++ +Y+  P + + L+  + 
Sbjct: 168 FIVIFDLNTVNITDYVNPMSGYMKLWQIRSELWQDWFPEMVQRIYLTNPPRLLGLLWKVA 227

Query: 535 KQVVSTKLASRLHV-HKTIDTGTEFLDKDLLPIEYGG 642
           +  +S +   R+ +     D   +FL   L+P EYGG
Sbjct: 228 RVFLSEENLKRIEIISDKSDLAGKFLPPWLVPKEYGG 264


>U40415-1|AAK39255.4|  445|Caenorhabditis elegans Hypothetical
           protein K02G10.3 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = -1

Query: 220 GICACEKTVENANFLTSMSSKKFGISVLNVHKLSIRVLARSTRPFVVISVRSRYSLLKSF 41
           G+    KT  +   +T++ SK+  +  +N  K  I V   S   F+V ++   + +L   
Sbjct: 42  GLIFSLKTYASFYLITNVVSKRGRLDKINWKKFGIDVCQSSL--FLVTNM-CFFLILLCK 98

Query: 40  FRKWFCFFT 14
           FRKW  FFT
Sbjct: 99  FRKWLGFFT 107


>AL132863-2|CAB60569.1|  317|Caenorhabditis elegans Hypothetical
           protein Y37H2A.4 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +1

Query: 244 RIYILKVYNDDFDASLVLDYYKYIVVVSEYLKIHDYCKGFEVILDYSDVNVMNFVTKFNP 423
           R     +Y D  D    ++++K I       K+       ++IL  SD N+   ++ F P
Sbjct: 131 RFIFSTIYEDTEDVETAMNWFKSISDSGNLWKVG------KIILRTSDCNIPRILSSFQP 184

Query: 424 VILR 435
            +LR
Sbjct: 185 AVLR 188


>AC006723-1|AAF59429.3|  534|Caenorhabditis elegans Hypothetical
           protein Y19D10B.2 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 111 TRIDNLCTFKTLMPNFFEDIDV 176
           T  +NLCTF  + P  F D++V
Sbjct: 457 TTSENLCTFPEICPKIFGDVEV 478


>AF003151-21|AAK18914.2|  259|Caenorhabditis elegans Hypothetical
           protein D1007.8 protein.
          Length = 259

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = -3

Query: 293 TREASKSSL*TFNIYIRLVILGQFRHMRV*ENGGKCKFLNVYVFEEIRHQRFKRAQIIDT 114
           T   ++ S   FN+  R+ + G+   +R+ ENG K  FLN +   +   ++F   QII  
Sbjct: 72  TASFTEESAKKFNVGDRVEVFGK---VRILENGKK--FLNAFSMHKASDEQFAAFQIICR 126

Query: 113 CFGSFHK 93
               F+K
Sbjct: 127 FSEKFYK 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,577,710
Number of Sequences: 27780
Number of extensions: 356279
Number of successful extensions: 899
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)