Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31166
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   0.54 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   6.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    20   6.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   8.8  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 0.54
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 122 DLRVVLCRGGSDDGSHK 72
           DL+++L  GG ++GS+K
Sbjct: 92  DLKIILSMGGWNEGSYK 108


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 17  RERTKTIKNEIDHRCSSR 70
           RER+ +  + I  RCSSR
Sbjct: 803 RERSGSESSSISERCSSR 820


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 189 CRWKSRNCSCKLHRGWRRIQ 130
           C WK    +CKL    R+++
Sbjct: 88  CDWKDSVKNCKLKNKERKVK 107


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 34  SFGSFPAGTP 5
           SFG FP G P
Sbjct: 192 SFGIFPGGAP 201


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 335 SSLVSEVRNGFR 300
           ++LV E+RN FR
Sbjct: 190 TALVREIRNAFR 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,748
Number of Sequences: 336
Number of extensions: 1464
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)