Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31166
         (359 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    63   1e-12
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.63 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   5.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   7.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   7.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   7.7  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 62.9 bits (146), Expect = 1e-12
 Identities = 35/80 (43%), Positives = 47/80 (58%)
 Frame = +3

Query: 120 IVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGK 299
           I   + + + DG Y  NFETSNGI   E+G+ K+    DN+  V+   +GS SYT  DG+
Sbjct: 29  ITSQQLEVNFDGNYINNFETSNGISHQESGQPKQV---DNETPVVS--QGSDSYTAPDGQ 83

Query: 300 PETITYFADETGYHAQGESI 359
             +ITY ADE G+  QG  I
Sbjct: 84  QVSITYVADENGFQVQGSHI 103


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 0.63
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 177 TSNGIVRSETGELKEAL 227
           TS G  R  TGE+KEA+
Sbjct: 403 TSKGEYRMSTGEMKEAI 419


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 245 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 138
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 460 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 495


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 245 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 138
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 375 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 410


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 245 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 138
           RL  +  +L     FA+H+ VGS  + V  +  AG+
Sbjct: 694 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 729


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 5/18 (27%), Positives = 14/18 (77%)
 Frame = +1

Query: 157 LTTTISRLPTASCVAKLV 210
           +T ++  +PT +C+A+++
Sbjct: 385 ITESLRLIPTTTCIARIL 402


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 95  GSDDGSHKGESYNDD 51
           GSD  +HK E  ND+
Sbjct: 310 GSDKENHKTEEPNDE 324


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 62  SSRPCGYRHRCPPYRGLP*D 121
           S  P  YR+ CP    +P D
Sbjct: 276 SENPADYRYFCPDGSKVPID 295


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 62  SSRPCGYRHRCPPYRGLP*D 121
           S  P  YR+ CP    +P D
Sbjct: 276 SENPADYRYFCPDGSKVPID 295


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 62  SSRPCGYRHRCPPYRGLP*D 121
           S  P  YR+ CP    +P D
Sbjct: 276 SENPADYRYFCPDGSKVPID 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,070
Number of Sequences: 438
Number of extensions: 1969
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)