Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31165
(340 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16) 72 1e-13
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14) 59 1e-09
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 58 1e-09
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 40 7e-04
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 39 0.001
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 34 0.034
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 33 0.045
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.045
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 33 0.078
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.10
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.10
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.42
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 29 0.73
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 28 2.2
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 27 3.9
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 27 3.9
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 27 3.9
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 26 6.8
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.8
SB_55225| Best HMM Match : efhand (HMM E-Value=5.7e-12) 26 6.8
SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 26 9.0
SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
>SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16)
Length = 168
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 QSSRGSRK-AKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGRL 332
+ +GS+K A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I +NDL+A DSLG+L
Sbjct: 4 KGKKGSKKKAQRATSNVFAMFEQSQIQEFKEAFNMIDQNRDGFIDKNDLKAVFDSLGKL 62
>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
Length = 133
Score = 58.8 bits (136), Expect = 1e-09
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 177 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
++A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I + DL+ SLG+
Sbjct: 12 KRAQRATSNVFAMFDQTQIQEFKEAFNMIDQNRDGFIDKEDLKDMYASLGK 62
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 58.4 bits (135), Expect = 1e-09
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 177 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
++A R SNVF+MF Q Q+ EFKEAF ++D + DG I + DL L SLG+
Sbjct: 12 KRAHRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGK 62
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
+++Q+AEFKEAF L D D DG I +L + SLG+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ 42
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 39.5 bits (88), Expect = 7e-04
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 198 SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
S+V S++QVAE KEAF L D D G I ++L + SLG+
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQ 321
Score = 29.1 bits (62), Expect = 0.96
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 237 EFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
E ++AF++ D + DG+I ++L+ + +LG
Sbjct: 364 EIQDAFKVFDKNGDGMISSSELKLVMSNLG 393
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
S+ Q+AE+KEAF + D+D++G I ++L + + +LG+
Sbjct: 5 SKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQ 41
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 237 EFKEAFQLMDHDKDGIIGENDLRATL 314
E + AF+ MD D DG I DL+ T+
Sbjct: 74 EIRMAFKSMDKDGDGFITFGDLKKTM 99
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 234 AEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
AE +EAF++ D + DG I E +LR+ + SLG
Sbjct: 73 AEMREAFRVFDRNGDGSISEWELRSVMASLG 103
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 33.5 bits (73), Expect = 0.045
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 153 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ + +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.5 bits (73), Expect = 0.045
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 153 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ + +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 32.7 bits (71), Expect = 0.078
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
++ QV E KEAF + D + DG I +L+ + SLG
Sbjct: 207 TESQVREIKEAFLVFDDNGDGCITATELKKLVTSLG 242
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 240 FKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
FKEAF L D D DG I +L + SLG+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ 31
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 240 FKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
FKEAF L D D DG I +L + SLG+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ 31
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
+++Q+ EFK AF D + DG I +L + S+G
Sbjct: 10 TEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIG 45
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 234 AEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
++ +EAF L D D +G+I +++ L +G
Sbjct: 217 SDLREAFSLFDKDGNGLISAQEMKFVLTCMG 247
Score = 26.2 bits (55), Expect = 6.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 234 AEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
++ +EAF L D D +G+I +++ +G
Sbjct: 88 SDLREAFSLFDKDGNGLISAQEMKFVFTCMG 118
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
+++Q+ EF+ +F D D+ G + N+ + L SLG
Sbjct: 512 TEEQMKEFRASFNFFDKDQTGKLEPNEFKQCLVSLG 547
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 29.5 bits (63), Expect = 0.73
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 240 FKEAFQLMDHDKDGIIGENDLRATLDSLG 326
F E F++ D + +G+IG +LR L SLG
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLG 35
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 153 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI 284
D + + GS K T ++ FS+K+ + +A HD DG+
Sbjct: 196 DLREAYGSSTTKETSASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 231 VAEFKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
++++++AF+ D D +G I +L A + SLG+
Sbjct: 47 ISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQ 79
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 243 KEAFQLMDHDKDGIIGENDLRATLDS 320
K+AF + D +KDG I D R L+S
Sbjct: 162 KQAFLVFDDNKDGRITRRDFRRILES 187
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 207 FSMFSQKQVAEFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
+S Q + EF E + D++ DG + LR L SLG
Sbjct: 72 YSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLG 111
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 243 KEAFQLMDHDKDGIIGENDLRATLDS 320
K+AF + D +KDG I D R L+S
Sbjct: 462 KQAFLVFDDNKDGRITRRDFRRILES 487
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 153 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEF 242
D SS+G R +R G F SQ Q+A++
Sbjct: 1017 DVHSSKGERIQRRGGGGGFGYKSQNQIADY 1046
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 210 SMFSQKQVA---EFKEAFQLMDHDKDGIIGENDLRATLDSLG 326
S + +KQ EF E ++ D D G + +LR+ L SLG
Sbjct: 578 SAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLG 619
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 192 TGSNVFSMFSQKQVAEFKEAFQLMDHDKDG 281
T +FS++Q+ EF++AF + ++KDG
Sbjct: 213 TDQEAAKLFSREQIEEFEDAFSV--YNKDG 240
>SB_55225| Best HMM Match : efhand (HMM E-Value=5.7e-12)
Length = 828
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 GSRKAKRTGSNVFSMFSQKQ-VAEFKEAFQLMDHDKDGIIGENDL 302
G R GS ++ + Q + FKE +++MD D D + N+L
Sbjct: 411 GLRTETADGSIALNLQNLAQHIVIFKEMYKIMDEDDDNRLDANEL 455
>SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 219 SQKQVAEFKEAFQLMDHDKDGIIGENDLR 305
SQ+Q +AFQL D G + ++DL+
Sbjct: 6 SQEQKTNILQAFQLADKTSKGYLDKHDLK 34
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 240 FKEAFQLMDHDKDGIIGENDLRATLDSLGR 329
+++AF+ D D +G I +L A + SLG+
Sbjct: 2 YRDAFKFFDKDGNGHITTRELGAIMRSLGQ 31
>SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 25.8 bits (54), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 183 AKRTGSNVFSMFSQKQVAEFK---EAFQLMDHDKDGIIGENDLRATLDSLGRLAC 338
AKRT + + ++ V E K EA+ +D I G DL + R+AC
Sbjct: 154 AKRTQLQLENQKLEEAVDELKRELEAYANSTEKRDNICGNQDLSEGIHPTARVAC 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.122 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,038,439
Number of Sequences: 59808
Number of extensions: 84644
Number of successful extensions: 311
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 311
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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