Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31160
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    25   0.79 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.7  

>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -3

Query: 321 SVGIGTGAPVTT-NSAARGIFDNLSCILVIFVFLGLCFVCI 202
           ++G+ T   +TT  S+       +S +  I V+LG CFV +
Sbjct: 101 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 141


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 526 PQPHPHRLIPGSPV 485
           P PHPH   P +PV
Sbjct: 737 PPPHPHHQPPRNPV 750


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 526 PQPHPHRLIPGSPV 485
           P PHPH   P +PV
Sbjct: 629 PPPHPHHQPPRNPV 642


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 625  PNPVFWRKDVC 657
            PN +FW KD C
Sbjct: 2266 PNGLFWNKDHC 2276


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 164 SLSSFVPCFSCELKQNKTSHELNIIANVNLI 72
           ++   +P F  +LK       LNII+N++ +
Sbjct: 363 TIEHLLPLFLTQLKDECPEVRLNIISNLDCV 393


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +3

Query: 240 PKCSSDYRKCPAQHCSSLLAHQC 308
           P+C  D  +C +  CS+     C
Sbjct: 293 PRCEGDINECLSNPCSNAGTLDC 315


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 693 HRRNYQKVLDWLT 655
           H  NY +V DW T
Sbjct: 666 HNPNYAEVTDWYT 678


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 358 NTAAKKPVPKAENPQPSVD 414
           +T    P P   NPQ  VD
Sbjct: 452 STTEAPPAPAVSNPQNEVD 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,503
Number of Sequences: 336
Number of extensions: 4066
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)