Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31160
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.08 |dlc1||dynein light chain Dlc1|Schizosaccharomyces p... 29 0.48
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 29 0.64
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.0
SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr ... 27 3.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.5
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ... 26 4.5
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 26 4.5
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 26 6.0
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 25 7.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 7.9
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 25 7.9
>SPAC1805.08 |dlc1||dynein light chain Dlc1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 111
Score = 29.5 bits (63), Expect = 0.48
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 571 QSFQWL*SALVVEPLPQPHPHR 506
QS++W+ S+ +V+ LP+ HP R
Sbjct: 52 QSYKWIVSSTLVQKLPEDHPSR 73
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 29.1 bits (62), Expect = 0.64
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 334 KESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTI 459
K SPP N+ A+KPVP+ N S +L +SP N K ++
Sbjct: 188 KNSPP--NSRTARKPVPRRAN-SASHNLGSTKSPNGNAKESL 226
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 301 TSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPS 408
TSA S+ I K S P NN + VP P P+
Sbjct: 1068 TSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPPA 1103
>SPBC146.04 |||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 444 ILGRRLEKG*VNRRLGILSFWYWFFGCSIVVGRWRLFL 331
IL RR++ + L ILSF W F +V WRLF+
Sbjct: 2 ILNRRIQV--ILPTLLILSFIIWIFHSVMVDKDWRLFM 37
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -3
Query: 387 FWYWFFGCSIVVGRWRLFL--NYFSVGIGTGAP--VTTNSAARGI 265
F WFFGC+++ G +LFL N + + T A +TT+S A +
Sbjct: 1950 FMCWFFGCTLISGP-QLFLKNNLKPLLLATHASHLITTSSIAASL 1993
>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 201
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 304 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 420
S+DS++ + +E+ + + A K +PK P PS DL+
Sbjct: 156 SSDSSSDV-DEETLIVSKSKKAHKDIPKFSAPPPSADLN 193
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 271 PRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSP 435
PR+ V +Y++ ++ K I ++ P +NNT + +PQ +Q+P
Sbjct: 448 PRTGVSKYFKLQKNTE-KEIDEQVPSQSNNTTPTSAKSDSASPQNWFSSFSYQTP 501
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 637 FWRKDVCQPVQYLLVVSSVS 696
FW ++CQ +QYLL ++ +S
Sbjct: 177 FWITNMCQQIQYLLWLTPLS 196
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 365 QPKNQYQKLRIPSLLLTYPFSN 430
QP NQ+Q ++PS L T P S+
Sbjct: 263 QPSNQFQTQKLPSGLDTRPVSS 284
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 274 RSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 399
RST R R++ S + + P NNT P P E P
Sbjct: 209 RSTARSAPRSTQRSRSSSANPVTTPPVNNTLLTPPAPPVELP 250
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 331 QKESPPANNNTAAKKPVPKAENPQPSVDL-SFFQSPPQNLKRTI 459
++ + P ++ + P P AEN QPSV +SP +L + I
Sbjct: 321 KEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKKESPATHLLKVI 364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,984,054
Number of Sequences: 5004
Number of extensions: 61856
Number of successful extensions: 228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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