Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31160
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 33 0.16
06_03_0416 + 20568087-20568702,20568767-20570313 31 0.67
10_08_0825 + 20831170-20831349,20831380-20831547,20831627-208316... 31 0.88
08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890 31 0.88
04_04_0418 + 25077748-25078101,25079413-25079538,25080683-250815... 31 1.2
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 30 1.5
04_03_0009 + 9313227-9313533,9314182-9314405,9315336-9315542 30 2.0
09_06_0053 - 20537433-20537833,20537910-20538456 29 2.7
09_01_0184 + 2693576-2693578,2694157-2694952,2695169-2695249,269... 29 2.7
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 28 6.2
05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238 28 6.2
05_01_0210 + 1583176-1584177 28 6.2
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 319 TKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVI 468
TK IQK P T A+ P+P+A P+ S+ ++ Q+P L + I
Sbjct: 147 TKDIQKPDEPQPGETQAESPLPEALQPESSLPVTQEQTPGNPLSGLLNAI 196
>06_03_0416 + 20568087-20568702,20568767-20570313
Length = 720
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 587 KSFQSPSPAKILDQTLSFGEKMCVSQSSTFW 679
+SF P+ ++ QTL G+K+ SST W
Sbjct: 159 RSFDHPTDTLVISQTLQMGQKLVARTSSTNW 189
>10_08_0825 +
20831170-20831349,20831380-20831547,20831627-20831698,
20831997-20832075,20832182-20832375,20832469-20832558,
20832851-20832940,20833196-20833282,20833477-20833560,
20833690-20833809,20834096-20834103,20834443-20834575,
20835044-20835125,20835330-20835496,20836006-20836493,
20836551-20836638,20836716-20836818,20836932-20837083,
20837191-20837316,20837459-20837529,20837691-20837753,
20838418-20838490,20838972-20839040,20839180-20839257,
20839434-20839484,20839586-20839696
Length = 1008
Score = 31.1 bits (67), Expect = 0.88
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = +1
Query: 376 PVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQVILXXXXXXXXXXXALPPKPTI 555
P P +P V F PP ++ ++ + IE LPP I
Sbjct: 25 PTPPPPASRPEVPNHFLPPPPSSISHSVYPVLDPIEVPARAAAAAAAARAIAGLPPHEKI 84
Query: 556 TIESSDEDELKVI-SIPITRQDLGPNPVFWRKDVCQPVQYLL 678
++ S+ ED + + S P VF++++ P++Y+L
Sbjct: 85 SLPSNSEDLVSIYGSNPQGHAVDELEEVFFQEEF-DPIKYIL 125
>08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890
Length = 468
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 345 WRLFLNYFSVGIGTGAPVTTNSAARGIFDNLSCILVIFVFLGL 217
W LF+ YF +G+GTG V N A G+ + V+ L
Sbjct: 250 WLLFVGYF-IGVGTGVTVLNNLAQIGVAAGIGDTTVLLSLFAL 291
>04_04_0418 +
25077748-25078101,25079413-25079538,25080683-25081593,
25081970-25082453
Length = 624
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 345 WRLFLNYFSVGIGTGAPVTTNSAARGIFDNLSCILVIFVFLGLC 214
W LF+ YF G+GTG V N A G+ ++ G C
Sbjct: 405 WLLFIVYFC-GVGTGVTVLNNLAQVGMAVGADDTTILLCLFGFC 447
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 322 KIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIEKQV 492
+++ E PPAN+ + P+ + PQ ++L+ +S NL T +H E+Q+
Sbjct: 454 EVVTNEEPPANDKPKRGRGRPRKQKPQDGLELTEKKS-TSNLS-TDNAYDHPAERQM 508
>04_03_0009 + 9313227-9313533,9314182-9314405,9315336-9315542
Length = 245
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +1
Query: 289 RYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 399
RYW+T S+T + E P + A P ENP
Sbjct: 44 RYWKTPVKSSTPAKKLEEPAQRKPSPAPSPPETVENP 80
>09_06_0053 - 20537433-20537833,20537910-20538456
Length = 315
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 550 SALVVEPLPQPHPHRLIP-GSPVFQFHAR 467
SA+V++P P P P+ P G+P F H R
Sbjct: 286 SAVVMDPYPTPGPYGAFPAGTPFFHGHPR 314
>09_01_0184 +
2693576-2693578,2694157-2694952,2695169-2695249,
2695454-2695793,2695799-2696258,2696404-2696526,
2696532-2697266
Length = 845
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +1
Query: 289 RYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIE 462
RYWRT S + E P ++A KP + N S ++ + + K IE
Sbjct: 529 RYWRTPVKSPVPAKKLEQPAQKKPSSAPKPKKERTNMDASKRAAYVKKIHEKTKEEIE 586
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 340 SPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTI 459
SPP A K+PVP P+ + S + PP RT+
Sbjct: 101 SPPPLGEVAPKQPVPAKLFDAPAAEASSSEPPPPPPPRTL 140
>05_04_0411 + 21057838-21058878,21059723-21059926,21060011-21060238
Length = 490
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 538 PPKPTITIESSDEDELKVISIP 603
PP PT T++ DEDE + I +P
Sbjct: 100 PPNPTPTLDLWDEDEFEGIPVP 121
>05_01_0210 + 1583176-1584177
Length = 333
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 532 PLPQPHPHRLIPGSPVFQFHARLPQW 455
P P P P L+P P RLPQW
Sbjct: 33 PPPPPPPPPLLPADPPSLERERLPQW 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,388,419
Number of Sequences: 37544
Number of extensions: 417725
Number of successful extensions: 1284
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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