Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31159
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.24 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    26   0.31 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   6.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.8  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
 Frame = +2

Query: 326 AAQHWPSLPS--MTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWCRAP--SPYHHSTPS 493
           AA+H PSL    +   A +  +LS   P   A        G   W ++P  +P   STPS
Sbjct: 26  AAEH-PSLRGTPLAMLAAQCNKLSNKSPPPLADAAV--GKGFHPWKKSPQGAPSPSSTPS 82

Query: 494 T--HIHTANRSRTVSAMTLTLLSFWCPYAASGIASTIFPSITSQP 622
           +     T+  + T S+ ++       P  AS  +   FP  TSQP
Sbjct: 83  SLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 460 RAKSLSPLDTIYSYSYGEPIPY 525
           RA+     +  ++Y YG+PIPY
Sbjct: 230 RARRKEIAEIAFAYKYGDPIPY 251


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 423 SVGANSTGLIFESLGCFGAQEVIDG 349
           S G N  G I  SLG  G++ V  G
Sbjct: 213 SFGTNLVGGIVRSLGTLGSRVVESG 237


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 386 LSKMRPVEFAPTLRL*STGLALW 454
           LS++R +E A  LRL    + +W
Sbjct: 142 LSRLRRIEIATCLRLSEKQVKIW 164


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 11/127 (8%)
 Frame = +1

Query: 373 EATKTFEDETRRIRADTAALIHRARSVVPRAKSLSPLDTIYSYSYGEP---IPYRFSN-- 537
           E  + F +ET+R+  D  A  H+     P    + P+      S GE    I    S+  
Sbjct: 141 EFIQIFNEETKRLVEDLEAESHK-----PYIDVVVPITQFTLLSIGETAMGIKLNASDND 195

Query: 538 -DAY---IAKL--LVPLRSVRDSIHNLSFYHESAKKFTGRGNLACVHYSGKEGLFQTVGH 699
            D Y   + K+  L+  R+ R  IHN + Y  + +    +  L  +H      + +   H
Sbjct: 196 KDGYKRAVYKIGQLLTYRAPRPWIHNETIYSLTPQGRKEQKVLKSLHSFSNNVIAERKKH 255

Query: 700 FTRSSAS 720
           F+ SS S
Sbjct: 256 FSSSSYS 262


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -2

Query: 252 HIRVRHESSYRPRCRTVNQF 193
           ++++ H+  YR  CR +  F
Sbjct: 25  YLKIYHKEKYRKFCRILKYF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,365
Number of Sequences: 336
Number of extensions: 3961
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)