Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31156
         (330 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   1.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 289 QQVHIWFQPQALRHPLQ 239
           +QV +WFQ + ++H  Q
Sbjct: 46  RQVKVWFQNRRMKHKRQ 62


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 289 QQVHIWFQPQALRHPLQ 239
           +QV +WFQ + ++H  Q
Sbjct: 177 RQVKVWFQNRRMKHKRQ 193


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 289 QQVHIWFQPQALRH 248
           +Q+ IWFQ + ++H
Sbjct: 130 RQIKIWFQNRRMKH 143


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 289 QQVHIWFQPQALRH 248
           +Q+ IWFQ + ++H
Sbjct: 121 RQIKIWFQNRRMKH 134


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 226 HSMYFGLLEIVPH 188
           HS  FG +E VPH
Sbjct: 69  HSPVFGKVEPVPH 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 29   LVPNSCSPG 3
            LVP +C+PG
Sbjct: 1229 LVPQNCAPG 1237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,324
Number of Sequences: 336
Number of extensions: 1618
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)