Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31156
         (330 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18896| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.2  
SB_46214| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)           27   2.8  
SB_43534| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)           27   2.8  
SB_26806| Best HMM Match : Annexin (HMM E-Value=0)                     27   3.7  
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   6.5  
SB_14261| Best HMM Match : ig (HMM E-Value=0)                          26   6.5  
SB_50431| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.5  
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.5  

>SB_18896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 379

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = +3

Query: 207 NPKYIEC--CQENWRGCLNAC 263
           N  YI C  C+++W GC N C
Sbjct: 89  NQLYIACDECEDDWMGCSNCC 109


>SB_46214| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)
          Length = 344

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 293 SAAGPHLVPATSIETSPPIFLAA-FNVFWVAGDSTSLLCSAST 168
           SA+GP  VP  +++T     LAA FN++ +AG     L    T
Sbjct: 213 SASGPDGVPCAALQTMGAASLAAHFNLWLLAGTQPKRLTECRT 255


>SB_43534| Best HMM Match : A_amylase_inhib (HMM E-Value=2.1)
          Length = 334

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 293 SAAGPHLVPATSIETSPPIFLAA-FNVFWVAGDSTSLLCSAST 168
           SA+GP  VP  +++T     LAA FN++ +AG     L    T
Sbjct: 250 SASGPDGVPCAALQTMGAASLAAHFNLWLLAGTQPKRLTECRT 292


>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
          Length = 829

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 166 LVLAEHNNEVLSPATQNTLNAAKKIGGDVSM--LVAGTKCGPAAESIAKAN 312
           LVL  +  +  S A  + LNAA   G  V++  +VAGT+ GP A+  A  N
Sbjct: 664 LVLISYGQDP-SQAAADKLNAALHDGDTVTVARIVAGTQQGPLADLEASYN 713


>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 269 PATSIETSPPIFLAAFNVFWVAGDSTSLLCS 177
           P T+  T+PP+   A N  WV+  +  L  S
Sbjct: 277 PPTAAPTAPPVDTTALNAAWVSAAAPILTSS 307


>SB_14261| Best HMM Match : ig (HMM E-Value=0)
          Length = 1337

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -2

Query: 311 FALAMDSAAGPHLVPATSIETSPPIFLAAF---NVFWVAGDSTSLLCSAS 171
           FA   ++ AG       +I  S P  +  F   N+    GDS  L+C+AS
Sbjct: 671 FACIPNNTAGSGQEATLNIPVSEPPSIVQFPSKNIILTEGDSKELMCNAS 720


>SB_50431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 359

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 NNEVLSPATQNTLNAAKKIGGDVS 255
           NN+V+ P +Q+  +A+K   GDVS
Sbjct: 251 NNQVIPPYSQSPASASKDHHGDVS 274


>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1333

 Score = 25.8 bits (54), Expect = 8.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 160 STLVLAEHNNEVLSPATQNTLNAAKKIGGDVSMLVAGT 273
           S+  LA+HN   L+P  +  LN   +I G + + V+ +
Sbjct: 785 SSQALAKHNATTLTPIQEAALNQGDEITGTMEVEVSSS 822


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,691,489
Number of Sequences: 59808
Number of extensions: 205208
Number of successful extensions: 831
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 463065397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)