Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31152
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   0.58 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.1  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   9.4  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 320 RRKLSFRMLSSWYCRNLRRCRSSICK*ATERVE*ARPDRHLP 445
           R KL+   +  W+     R R  I   AT  V    P+R+ P
Sbjct: 256 RTKLTEARIQVWFSNRRARLRKQITSAATPLVRSYAPERYPP 297


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 289 PLNNMGEVHLAEEVKLPNV 345
           PLN + EV L +EV+ PN+
Sbjct: 575 PLNAIVEVVLVDEVQSPNL 593


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 289 PLNNMGEVHLAEEVKLPNV 345
           PLN + E+ L +EV+ PN+
Sbjct: 575 PLNAIVEIVLVDEVQQPNL 593


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 188  TNVSTYKSDAGVETIKLELQENLISWISNGV 96
            T  +TYK D  +  + + L   +I+W   GV
Sbjct: 1315 TFTTTYKEDVTLPCLAVGLPPPVITWKIKGV 1345


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 159 RSGNY*TRITRKPYFVDF 106
           RS  Y TR+  +PY   +
Sbjct: 375 RSNKYPTRVPHRPYVAQY 392


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 319 PNALHPYYLMG*N*DT*SNDGIIE 248
           PN  H YY+ G + +  +N   +E
Sbjct: 475 PNQKHIYYITGESKEQVANSSFVE 498


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 343 HSEA*LPPPNALHPYY 296
           H+ A  PPP+   P+Y
Sbjct: 23  HNPAYSPPPSYCDPWY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,877
Number of Sequences: 336
Number of extensions: 1932
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)