Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31145
(402 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 213 1e-54
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 145 3e-34
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 130 1e-29
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 126 2e-28
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 124 9e-28
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 119 2e-26
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 116 1e-25
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 103 1e-21
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 95 6e-19
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 91 1e-17
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 88 7e-17
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 86 3e-16
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 80 1e-14
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 79 2e-14
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 79 2e-14
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 75 4e-13
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 75 5e-13
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 75 7e-13
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 73 2e-12
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 73 3e-12
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 66 2e-10
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 65 4e-10
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 64 7e-10
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 64 1e-09
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 63 2e-09
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 63 2e-09
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 62 5e-09
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 60 1e-08
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 57 1e-07
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 53 2e-06
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 52 4e-06
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 51 7e-06
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 44 9e-04
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 42 0.006
UniRef50_Q6BTR8 Cluster: Similar to sp|P08640 Saccharomyces cere... 37 0.13
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 36 0.40
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 35 0.69
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 34 0.91
UniRef50_UPI0000E23955 Cluster: PREDICTED: similar to heat shock... 33 1.6
UniRef50_UPI0000DA292B Cluster: PREDICTED: similar to Calpain sm... 33 1.6
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 2.1
UniRef50_UPI0000F2BAEC Cluster: PREDICTED: hypothetical protein;... 33 2.8
UniRef50_O84054 Cluster: Putative uncharacterized protein; n=3; ... 33 2.8
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 2.8
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 2.8
UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplas... 33 2.8
UniRef50_P58133 Cluster: Plastid 30S ribosomal protein S3; n=1; ... 33 2.8
UniRef50_UPI00015B59E8 Cluster: PREDICTED: hypothetical protein;... 29 3.4
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 32 3.7
UniRef50_A2BFQ2 Cluster: Novel protein similar to vertebrate ins... 32 4.9
UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-len... 31 6.4
UniRef50_Q6REG5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_A3WCD2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.4
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=... 31 8.5
UniRef50_Q027N5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q5SMV0 Cluster: Putative uncharacterized protein P0470C... 31 8.5
UniRef50_A5BBR4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q5AJH2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 213 bits (519), Expect = 1e-54
Identities = 98/115 (85%), Positives = 105/115 (91%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+RYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP
Sbjct: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 164
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVP 358
N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P
Sbjct: 165 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILP 219
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 145 bits (351), Expect = 3e-34
Identities = 65/102 (63%), Positives = 82/102 (80%)
Frame = +2
Query: 44 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRH 223
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 224 VLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 349
LLRQG +G++VKIML D +G++GP P PD +++ PK++
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKED 131
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 130 bits (313), Expect = 1e-29
Identities = 64/112 (57%), Positives = 80/112 (71%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
++ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR RAKS K+ DG MIHSG P
Sbjct: 106 LKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPT 165
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 349
D+++ A RHVL+RQGVLGIKVKIM + GP + PD + + E KDE
Sbjct: 166 RDFIDIAIRHVLMRQGVLGIKVKIMKD-PAANRFGP-RALPDAVKIAEAKDE 215
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 126 bits (304), Expect = 2e-28
Identities = 56/111 (50%), Positives = 79/111 (71%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+R K++GG+ RRA L+ + A+GC+++VSGKL+GQRAKS+KF DG++IHSGD
Sbjct: 116 IREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAV 175
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 346
DY+NT V +QGV+GI+V+IMLP+D +G GP P PD I + EP +
Sbjct: 176 KDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 124 bits (298), Expect = 9e-28
Identities = 56/111 (50%), Positives = 76/111 (68%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+RYKLI + RRA Y ++RF+M++GARGCEV +SGKLRG RA + K+ +G M+ SGD
Sbjct: 106 LRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVT 165
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 346
+V A H+ ++Q +GI+V IML D G +GPK+ QPD I V E KD
Sbjct: 166 KQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 119 bits (287), Expect = 2e-26
Identities = 52/112 (46%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+ YKL+ + VR A +++ +++ GA+GCE+++SGKL+ QRAK+MKF G MI +G P
Sbjct: 118 MNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPK 177
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQ--GKNGPKKPQPDHILVTEPK 343
NDY++ A RHV +QG++G+KVKIMLP++ K G K P PD++++ PK
Sbjct: 178 NDYIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPK 229
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 116 bits (280), Expect = 1e-25
Identities = 58/110 (52%), Positives = 74/110 (67%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+R+KL+ L VRRA G++R++MESGA+GCEV + GK++GQRAKSM F DG MI SG
Sbjct: 156 LRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAH 215
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 343
+V+TATRH LR G +G+ VKIM P Q + PD I V EPK
Sbjct: 216 KHFVDTATRHCHLRAGTIGVNVKIMRP---QSMIEEDEVLPDVITVIEPK 262
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 103 bits (248), Expect = 1e-21
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = +2
Query: 134 QRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQ 313
QRAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGIKVKIML WD GK GPK P
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTPL 61
Query: 314 PDHILVTEPK 343
PD++++ PK
Sbjct: 62 PDNVVIHMPK 71
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 94.7 bits (225), Expect = 6e-19
Identities = 42/87 (48%), Positives = 62/87 (71%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+R KL + +RRA Y ++R M +GA GCEV+V+GKLR QRA++ KF +G +I +G P
Sbjct: 111 LRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPK 170
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLP 274
++ ATRH+ +RQGV+G+KV+I P
Sbjct: 171 RIFLAEATRHIKMRQGVIGVKVRIYNP 197
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 90.6 bits (215), Expect = 1e-17
Identities = 48/96 (50%), Positives = 61/96 (63%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+R+KL+GGL VRRA YGVL F+MESG +GCEV+ +I SG P
Sbjct: 159 LRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI----------------GWYIISSGQPV 202
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 301
DY+N+ RHVLL+QGVL IKVKI++ QG+ GP
Sbjct: 203 KDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 87.8 bits (208), Expect = 7e-17
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = +2
Query: 77 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIK 256
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N YV+T+ HVLLRQGVLG K
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 257 VKIMLPWDQ 283
+ P Q
Sbjct: 140 CRSCFPGTQ 148
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 85.8 bits (203), Expect = 3e-16
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = +2
Query: 125 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPK 304
L QRAKSMKF DG +I SG P DY++ A RHV LRQGVLGIKVKIM WD +GK
Sbjct: 116 LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKVKIMFNWDPKGKQSLT 174
Query: 305 KPQPDHILVTEP 340
P PD + + P
Sbjct: 175 TPLPDLVTIQTP 186
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 80.2 bits (189), Expect = 1e-14
Identities = 35/91 (38%), Positives = 58/91 (63%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 181
+ H++ L G+ R+ + +R +M SGA+G ++VSGKL G+R+++ KF+DG M H
Sbjct: 94 VGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHC 153
Query: 182 GDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 274
G+P VN + + L+ G++G+ VKIM P
Sbjct: 154 GEPAEALVNKSHQLAKLKLGIVGVTVKIMRP 184
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 79.4 bits (187), Expect = 2e-14
Identities = 40/89 (44%), Positives = 56/89 (62%)
Frame = +2
Query: 8 HEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGD 187
+ V L+ G+ RRA L IM +GARG E+V+SGKL QR ++ KF G + SG+
Sbjct: 98 YRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGE 157
Query: 188 PCNDYVNTATRHVLLRQGVLGIKVKIMLP 274
P + V+ A HVLL+ G+ G+KV+IM P
Sbjct: 158 PGEELVDEAIVHVLLKLGMYGVKVRIMKP 186
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 79.4 bits (187), Expect = 2e-14
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G+ RRA Y LR IM +GARG E+ +SGKL G+RAKS++F G + G+P V+
Sbjct: 106 GIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKG 165
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
LL+ GV+G+KV IM P
Sbjct: 166 YAQALLKLGVIGVKVAIMPP 185
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 75.4 bits (177), Expect = 4e-13
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+GDP V
Sbjct: 105 GWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKG 164
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+ + GVLG+ V+I+ P
Sbjct: 165 FDIAIKKLGVLGVSVRIIPP 184
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 74.9 bits (176), Expect = 5e-13
Identities = 36/80 (45%), Positives = 51/80 (63%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G R+A + LR +M +GA GCEVV+SGKL G R++ KFVDG + HSG+P + V+
Sbjct: 106 GWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEG 165
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+ + G LG KV+I+ P
Sbjct: 166 FAVAVKKLGTLGCKVRIIQP 185
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 74.5 bits (175), Expect = 7e-13
Identities = 37/89 (41%), Positives = 53/89 (59%)
Frame = +2
Query: 8 HEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGD 187
H++ L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G+
Sbjct: 96 HKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGE 155
Query: 188 PCNDYVNTATRHVLLRQGVLGIKVKIMLP 274
P +V V L+ GVLG+ V+IM P
Sbjct: 156 PSVKHVREGFATVQLKPGVLGVYVRIMPP 184
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 73.3 bits (172), Expect = 2e-12
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G R+A +R IMESGA GCEV+V+GKL G R+++ KF +G + H G+P V
Sbjct: 106 GWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKG 165
Query: 215 TRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV-PLE 364
+ + G +G++VKI+ P + P +L EPK P P+E
Sbjct: 166 YALAIKKLGTIGVQVKIVPP-------DARLPDAFDVLEPEPKKAPAEPIE 209
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 72.5 bits (170), Expect = 3e-12
Identities = 32/80 (40%), Positives = 53/80 (66%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G+P ++Y+
Sbjct: 114 GIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEG 173
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+ + G +G+ V+IM P
Sbjct: 174 YVQAVTKPGAIGVTVRIMPP 193
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 66.5 bits (155), Expect = 2e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G RRA Y LR IM +GA G +V VSGKLRG+RA+ K++ G + SG+ + A
Sbjct: 111 GFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRA 170
Query: 215 TRHVLLRQGVLGIKVKI 265
HVLL+ GV G++V I
Sbjct: 171 IAHVLLKVGVEGVEVII 187
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 65.3 bits (152), Expect = 4e-10
Identities = 29/74 (39%), Positives = 47/74 (63%)
Frame = +2
Query: 47 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 226
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++++ + ++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYL 217
Query: 227 LLRQGVLGIKVKIM 268
++G LGI +KIM
Sbjct: 218 NKKRGTLGINIKIM 231
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 64.5 bits (150), Expect = 7e-10
Identities = 30/80 (37%), Positives = 51/80 (63%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G+P + V++
Sbjct: 106 GWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSG 165
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+++ G +G++VKI+ P
Sbjct: 166 VGVAVMKLGTIGVRVKIIPP 185
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 63.7 bits (148), Expect = 1e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 47 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 226
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD + V+ A
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKA 172
Query: 227 LLRQGVLGIKVKIMLP 274
LL++GV G++V I+ P
Sbjct: 173 LLKRGVYGVEVVIVRP 188
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 62.9 bits (146), Expect = 2e-09
Identities = 32/106 (30%), Positives = 61/106 (57%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G + V A
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Query: 215 TRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 352
VLL+ G+ ++V++ LP D + + + P+ + V + +++P
Sbjct: 164 VIPVLLKPGIFSVRVRV-LPPDAKLSDRFEVKSPEEVQVKQIENKP 208
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 62.9 bits (146), Expect = 2e-09
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 181
+ + + + G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G +
Sbjct: 105 VAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKI 164
Query: 182 GDPCNDYVNTATRHVLLRQGVLGIKVKI 265
G + V A HVLL+ G+ GI+V+I
Sbjct: 165 GYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 61.7 bits (143), Expect = 5e-09
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G RRA + +R IM SGA G EV+VSGKL +RAK K +G + SG ++ A
Sbjct: 107 GYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRA 166
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+L+ GV G++V I P
Sbjct: 167 IGIAMLKPGVYGVEVVITKP 186
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 60.5 bits (140), Expect = 1e-08
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G RRA + +R IM +GA G E+++SGKL +RA+ K +G++ SG ++ A
Sbjct: 107 GYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRA 166
Query: 215 TRHVLLRQGVLGIKVKIMLPWDQQGK-NGPKKPQ-PDHILVT 334
+L+ G+ G++V I P + K N + P P + VT
Sbjct: 167 IAIAMLKPGIFGVEVVITKPLKIEDKINLKESPSVPQEVSVT 208
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 56.8 bits (131), Expect = 1e-07
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 181
I ++ L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +S
Sbjct: 94 IAKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYS 153
Query: 182 GDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 274
G+P + + T L+ G+LG+ VKI+ P
Sbjct: 154 GEPGSKGMITGFSTAKLKVGILGVTVKILNP 184
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 53.2 bits (122), Expect = 2e-06
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 214
G RRA + + IM++GARGC +++SGK+ G R + KF G + G+ +++
Sbjct: 110 GWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEG 169
Query: 215 TRHVLLRQGVLGIKVKIMLP 274
+ + G +G V+IM P
Sbjct: 170 FSTAVKKLGTVGCTVRIMRP 189
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 52.0 bits (119), Expect = 4e-06
Identities = 23/82 (28%), Positives = 50/82 (60%)
Frame = -3
Query: 268 HDFDLDS*YSLSEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGT 89
H+ D D+ +LS +H+S +V+ ++ ++RVDHE++ L G+ ++Q +N T T
Sbjct: 82 HNLDSDTQNTLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLST 141
Query: 88 RFHDETENTIASTTYSETSDKL 23
H ++++T+ +++ +T +L
Sbjct: 142 SSHGKSQHTVGGSSHWQTVQQL 163
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 52.0 bits (119), Expect = 4e-06
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +2
Query: 35 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 211
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G + V
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLD 165
Query: 212 ATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEGGP 373
HV G++GI+++I D+ K+ K + D + +P+ V E P
Sbjct: 166 DVVHVKTPMGLIGIRIRIARR-DKFRKDFEMKAEKDVVPAPKPEHHDVKDETDP 218
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 51.2 bits (117), Expect = 7e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Frame = +2
Query: 41 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 220
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G ++ A
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFN 167
Query: 221 HVLLRQGVLGIKVKIMLP 274
L+ GV GI V I+ P
Sbjct: 168 IAYLKPGVAGIHVTILKP 185
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 44.4 bits (100), Expect = 9e-04
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +2
Query: 41 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPCNDYVNTA 214
A RRA + +MESGARG +V++SG+L G ++A++ K ++G + +H+ DY
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTAL 189
Query: 215 TRHVLLRQGVLGIKVKI 265
R G+LGIKV +
Sbjct: 190 AR---TTYGILGIKVLV 203
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 41.5 bits (93), Expect = 0.006
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMI 175
+ + +L G +A RRA + M GA G ++ VSG+L G + A+S F +G +
Sbjct: 115 VAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKEGRTPL 174
Query: 176 HSGDPCNDYVNTATRHVLLRQGVLGIKVKI 265
H+ DY A L + G+LGIKV I
Sbjct: 175 HTLRADIDY---ALAEALTKVGLLGIKVWI 201
>UniRef50_Q6BTR8 Cluster: Similar to sp|P08640 Saccharomyces
cerevisiae YIR019c STA1 extracellular alpha-1; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P08640
Saccharomyces cerevisiae YIR019c STA1 extracellular
alpha-1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 840
Score = 37.1 bits (82), Expect = 0.13
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 235 SEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIA 56
SE +GSS VI ++ +H +I H L T + + TT T++ D E T +
Sbjct: 273 SEHQPTGSSHGVI-TNTAKSEHHTIGSTH---GLITNTEKSEHLTTEETKYADNEERTAS 328
Query: 55 STTYSETSDKLVSYLVPN 2
T ET D LVS L+P+
Sbjct: 329 HT---ETEDLLVSSLIPH 343
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 35.5 bits (78), Expect = 0.40
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGD 187
V +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H+
Sbjct: 119 VAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFR 178
Query: 188 PCNDYVNTATRHVLLRQGVLGIKVKI 265
DY A L G +G+KV I
Sbjct: 179 ADIDY---ALAEALTTYGKIGVKVWI 201
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 34.7 bits (76), Expect = 0.69
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMI 175
I + Y+L ++ RRA ++ M +GA G + +G+L G + A++ ++ +G + +
Sbjct: 118 IGENIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPL 177
Query: 176 HSGDPCNDYVNTATRHVLLRQGVLGIKV 259
H+ DY + T H + G +GIKV
Sbjct: 178 HTLRANVDYA-SVTAHTI--AGAIGIKV 202
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 34.3 bits (75), Expect = 0.91
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 LAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNT 211
+A RRA G ++ + +GA+G +VSG+L G A+ ++ +G + +H+ DY
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTVPLHTLRADIDY--- 191
Query: 212 ATRHVLLRQGVLGIKVKI 265
+ + G LGIK I
Sbjct: 192 SWDEAMTSYGNLGIKTWI 209
>UniRef50_UPI0000E23955 Cluster: PREDICTED: similar to heat shock
protein 2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to heat shock protein 2 - Pan troglodytes
Length = 640
Score = 33.5 bits (73), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 255 RSKSCCRGTSKARTARRSHNQTTSW*QSPR 344
RS+SCCR +S AR+ R+ T W +PR
Sbjct: 348 RSRSCCRISSTARSXTRASTPTRRWPMAPR 377
>UniRef50_UPI0000DA292B Cluster: PREDICTED: similar to Calpain small
subunit 1 (CSS1) (Calcium-dependent protease small
subunit 1) (Calcium-dependent protease small subunit)
(CDPS) (Calpain regulatory subunit) (Calcium-activated
neutral proteinase small subunit) (CANP small
subunit)...; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Calpain small subunit 1 (CSS1)
(Calcium-dependent protease small subunit 1)
(Calcium-dependent protease small subunit) (CDPS)
(Calpain regulatory subunit) (Calcium-activated neutral
proteinase small subunit) (CANP small subunit)... -
Rattus norvegicus
Length = 165
Score = 33.5 bits (73), Expect = 1.6
Identities = 26/55 (47%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 372 GPPSRGTGSSLGSVTR-MWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVA 211
G SRG G SLG V R + SG G C G +I T IPST L ST L A
Sbjct: 36 GGRSRGLGGSLGKVLRGLISGAAGSGGTAMCGVLGGVIST-IPSTRLLCSTTLSA 89
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.1 bits (72), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 61 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 165
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_UPI0000F2BAEC Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 309
Score = 32.7 bits (71), Expect = 2.8
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 243 Y*ESRSKSCCRGTSKARTARRSHN--QTTSW*QSPRTSPCPS 362
Y SRS+S S++R+ RSH+ Q+ SW S SP PS
Sbjct: 36 YSRSRSRSWSHSGSRSRSRSRSHSRSQSQSWSHSHSASPSPS 77
>UniRef50_O84054 Cluster: Putative uncharacterized protein; n=3;
Chlamydia|Rep: Putative uncharacterized protein -
Chlamydia trachomatis
Length = 520
Score = 32.7 bits (71), Expect = 2.8
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +2
Query: 140 AKSMKFVDGLM--IHSGDPCNDYVNTAT---RHVLLRQGVLGIKVKIMLPWDQQGKNGPK 304
A ++K+V G++ I + D + +N+AT + + L Q LGI++ I D +
Sbjct: 167 AATVKYVKGIVDKILNNDKLSTALNSATEVEKKIALAQKALGIEITINPDADTNPDTDQE 226
Query: 305 KPQPDHILVTEPKDEP 352
P P + TE K+ P
Sbjct: 227 TPDPAPVADTEEKESP 242
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 2.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 29 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 175
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 2.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 56 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 154
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 257
Score = 32.7 bits (71), Expect = 2.8
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +2
Query: 65 VLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQ 238
V++ ++++GARG + VSG+L G + A+ + G+M +H+ DY + +
Sbjct: 140 VIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHTLRADIDY---SMQEAHTTY 196
Query: 239 GVLGIKVKI 265
G++G+KV I
Sbjct: 197 GIIGVKVWI 205
>UniRef50_P58133 Cluster: Plastid 30S ribosomal protein S3; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S3 -
Astasia longa (Euglenophycean alga)
Length = 219
Score = 32.7 bits (71), Expect = 2.8
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLR-GQRAKSMKFVDGLMIH 178
I +++RYKL + R+ + I+ G +G ++ +SG+L + A+ F +G +
Sbjct: 131 IANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMAREESFREGKVPL 190
Query: 179 SGDPCN-DYVNTATRHVLLRQGVLGIKV 259
+ N DY + + + G LGIKV
Sbjct: 191 NTLKANIDYFHCTAKTL---SGSLGIKV 215
>UniRef50_UPI00015B59E8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 271
Score = 28.7 bits (61), Expect(2) = 3.4
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 77 IMESGARGCEVV---VSGKLRGQRAKSMKFVDGLMIHSGDP 190
I AR C V+ V KL+ +A K VDG I++G P
Sbjct: 54 IPRQSARYCHVIFPNVEEKLKNMKALKKKLVDGKPIYAGPP 94
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 302 KKPQPDHILVTEPKDEP 352
KKP+ I+V +P D+P
Sbjct: 103 KKPKQKKIVVPDPTDDP 119
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 32.3 bits (70), Expect = 3.7
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 IRHEVRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-I 175
+ ++ KL R A +R M+SGA+G + VSG+L G A+S + +G M +
Sbjct: 120 LAEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEMKL 179
Query: 176 HSGDPCNDYVNTATRHVLLRQGVLGIKV 259
H+ D+ R G +G+KV
Sbjct: 180 HTLRQDVDFAMATAR---TTYGAIGVKV 204
>UniRef50_A2BFQ2 Cluster: Novel protein similar to vertebrate insulin
receptor substrate 1; n=2; Danio rerio|Rep: Novel protein
similar to vertebrate insulin receptor substrate 1 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1179
Score = 31.9 bits (69), Expect = 4.9
Identities = 29/76 (38%), Positives = 31/76 (40%)
Frame = +3
Query: 174 STLETLAMITSTLLPDMCFSDKEY*ESRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSP 353
S TL + TLLP S EY K RG K RTA S N T Q P
Sbjct: 823 SKANTLPRVRETLLPTASQSPGEYVSIVYKGE-RGGHKGRTAVESGNSRTQGHQRAFHRP 881
Query: 354 CPSRGGPVPNSPYSES 401
P +GG N P S S
Sbjct: 882 QPCQGGSA-NLPRSFS 896
>UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833401I21 product:splicing
factor, arginine/serine-rich 2 (SC- 35), full insert
sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA,
RIKEN full-length enriched library, clone:4833401I21
product:splicing factor, arginine/serine-rich 2 (SC-
35), full insert sequence - Mus musculus (Mouse)
Length = 254
Score = 31.5 bits (68), Expect = 6.4
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 252 SRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPSRGGPVPNSPYSES 401
SR++S R TSK+R+ARRS ++++S +S S SR P ES
Sbjct: 150 SRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRVRSRSRSPPPVSKRES 199
>UniRef50_Q6REG5 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. DK17|Rep: Putative uncharacterized
protein - Rhodococcus sp. DK17
Length = 202
Score = 31.5 bits (68), Expect = 6.4
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 249 ESRSKSCCRGTSKARTARRSHNQT-TSW*QSPRTSPCPSRGGPV 377
+SR + CC G + TAR S+ + R P P RGGPV
Sbjct: 128 DSRRRGCCVGARRPGTARTSYGEPGRQCVGLRRRLPGPDRGGPV 171
>UniRef50_A3WCD2 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter sp. NAP1|Rep: Putative uncharacterized
protein - Erythrobacter sp. NAP1
Length = 999
Score = 31.5 bits (68), Expect = 6.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 336 SVTRMWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVAVLT 202
S+ R WS G P W+ G LT++P + RS ++A LT
Sbjct: 135 SLVRRWSWASPHGNASPPWTGGTPHLTIVPESVSRRSEIVLADLT 179
>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=1;
Mus musculus|Rep: Beta-D-galactosidase fusion protein -
Mus musculus (Mouse)
Length = 121
Score = 31.1 bits (67), Expect = 8.5
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 384 NWVPGPPSRGTGS-SLGSVTRMWSGCGFFGPFLPCWSHG 271
+WVPGPPSR T S SL S + + FG F C + G
Sbjct: 18 SWVPGPPSRSTVSISLISNSFFFKQKDLFGIFQVCQALG 56
>UniRef50_Q027N5 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 158
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 372 GPPSRGTGSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPSTPCL 232
GP + SLG V + GC LP W G + LT++ +T L
Sbjct: 29 GPAAYWVNDSLGGVFYVILGCLALSLLLPRWKAGRIALTVLAATSML 75
>UniRef50_Q5SMV0 Cluster: Putative uncharacterized protein
P0470C02.8; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0470C02.8 - Oryza sativa subsp. japonica (Rice)
Length = 165
Score = 31.1 bits (67), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 252 SRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPSRGG 371
+R++SC R TA R + SW Q R PC G
Sbjct: 122 TRARSCPRSPEPETTATRRRRRRISWSQPQRLHPCEDEEG 161
>UniRef50_A5BBR4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 246
Score = 31.1 bits (67), Expect = 8.5
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 246 STPCLRS-TCLVAVLT*SLQGSPEWIMSPSTNFIDLAR*PRSLPDTTTSQPRAP 88
S+P LR T +V T S+ SP+ + + +T D + PRSL + S PR+P
Sbjct: 170 SSPSLRCRTTVVXAQTPSIDESPK-LQAKTTTPTDTVKTPRSLLSSNPSSPRSP 222
>UniRef50_Q5AJH2 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 31.1 bits (67), Expect = 8.5
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 24 SLSEVSLYVVLAMVFSVSSWNLVPVVVKLL 113
+L +S+++VL ++FS+SSW +V + ++L
Sbjct: 3 TLRPISIFIVLHIIFSLSSWVIVSIPYRVL 32
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,240,466
Number of Sequences: 1657284
Number of extensions: 8959945
Number of successful extensions: 31539
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 29867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31474
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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