Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31145
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 180 4e-46
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 30 0.60
02_05_0237 + 27095817-27097433 30 0.79
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 1.4
06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699 29 1.4
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 1.4
08_02_0478 + 17621678-17623768 28 2.4
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 28 2.4
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 3.2
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 4.2
08_01_0346 - 3063440-3064189 27 5.6
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 27 5.6
06_02_0108 - 11917186-11917207,11917834-11917943,11918116-11918544 27 5.6
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 5.6
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 27 5.6
01_06_1475 + 37634831-37636297 27 5.6
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 27 5.6
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 27 7.3
05_03_0039 - 7621613-7622695 27 7.3
01_06_1107 + 34568091-34568341,34568455-34568540,34569204-345692... 27 7.3
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 26 9.7
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 26 9.7
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 26 9.7
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 180 bits (438), Expect = 4e-46
Identities = 83/112 (74%), Positives = 94/112 (83%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+RYKL+GGLAVRRACYGVLRF+MESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P
Sbjct: 107 LRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPV 166
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 349
N Y+++A RHVLLRQGVLGIKVKIML WD +GK GP P PD + + PKDE
Sbjct: 167 NLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDE 218
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 30.3 bits (65), Expect = 0.60
Identities = 16/76 (21%), Positives = 36/76 (47%)
Frame = -3
Query: 244 YSLSEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETEN 65
+ L++ + GS +++ V R D +++Y+ G ++ +NN +++G HD N
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGN 798
Query: 64 TIASTTYSETSDKLVS 17
I ++ +S
Sbjct: 799 VIGQGDQDSEKNRYLS 814
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 0.79
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 351 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 244
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 155 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 51
T L H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>06_03_0546 + 21988896-21989009,21989039-21989422,21989475-21989699
Length = 240
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 276 GTSKARTARRSHNQTTSW*QSPRTSPCPSRGGPVPNSPYSE 398
G + R ++ HN++ P SP P P P PY E
Sbjct: 67 GEKRRRKKKKKHNKSKHHHTPPPPSPTPRPSPPSPICPYEE 107
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 NDYVNTATRHVLLR----QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 343
++ +N H+ +R QGVL +++ + +Q +NGP+K + L+TE K
Sbjct: 359 SERINGIVNHLRIRGNPVQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHK 412
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 152 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 247
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = +2
Query: 41 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 220
A R A G++ + + G G SG+ RGQ +++ ++G + +Y++ A
Sbjct: 472 AARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLYQGYPVFREYLDEALV 531
Query: 221 HVLLRQGVLGIKVKI 265
+L + + +++
Sbjct: 532 EILGEEVARNVTLRV 546
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 336 SVTRMWSGCGFFGPFLPCWSH 274
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 185 LQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 90
+QSG+ LIWH+ + C+I+ H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 26 LIGGLAVRRACYGVLR 73
L+GG A ACYGVLR
Sbjct: 228 LLGGWAAMAACYGVLR 243
>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 216 PDMCFSDKEY*ESRSKSCCRGTSKARTARRSHN 314
PD SD EY E S R + K R+ RRS +
Sbjct: 962 PDTDSSDHEYEERHKSSSRRSSDKDRSRRRSRH 994
>06_02_0108 - 11917186-11917207,11917834-11917943,11918116-11918544
Length = 186
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +3
Query: 294 TARRSHNQTTSW*QSPRTSPCPSR----GGPVPNSP 389
TA + +TT W R SP P R GPVP P
Sbjct: 80 TAAVENTRTTGWTDEARISPSPPRTARTRGPVPAPP 115
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +3
Query: 252 SRSKSCCRGTS-KARTARRSHN------QTTSW*QSPRTSPCPSRGGPVPNSPYSE 398
SRS+S R S ++R+A RSH+ ++ S +SP PSR P SP E
Sbjct: 216 SRSRSYSRSRSPRSRSASRSHSPVKERSRSASQSRSPVKERSPSRSPPPATSPPRE 271
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 312 CGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEW 175
C F P P H ++ L+PS C T +A L G P++
Sbjct: 314 CYRFSPEFPVIIHNELMFLLLPSCSCFDYTNGLADLVVGYMGVPKY 359
>01_06_1475 + 37634831-37636297
Length = 488
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 369 PPSRGTGSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRSTC 220
PP + +G+ S +W+ CG PF P S T + PC C
Sbjct: 109 PPQQVSGALDISSDLVWTACGATAPFNPVRS------TTVADVPCTDDAC 152
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 252 SRSKSCCRGTSKARTARRSHNQTTSW*QSPR 344
SRS S RG S+ R+ RS +++ S QSPR
Sbjct: 141 SRSPSPRRGRSRGRSYSRSRSRSYSRSQSPR 171
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 252 SRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPSR 365
SRS S R S++R+ RS +++ SW +S S PSR
Sbjct: 1234 SRSLSS-RSRSRSRSWSRSRSRSRSWSRSRSRSRSPSR 1270
>05_03_0039 - 7621613-7622695
Length = 360
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 272 PWDQQGKNGPK-KPQPDHILVTEPKDEPVP 358
P + + K PK KP P H EPK EP P
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP 82
>01_06_1107 +
34568091-34568341,34568455-34568540,34569204-34569292,
34569406-34569530,34569825-34569901,34570210-34570862
Length = 426
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 299 PKKPQPDHILVTEPKDEPVPLEGGPGTQFAL 391
P PQP + TEP+ EP PG++ L
Sbjct: 249 PPPPQPPSVCKTEPELEPPQPAAPPGSESLL 279
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = -2
Query: 197 HCKGLQSGS*VHL-QTSLIWHVDHA-----ACQIQQLHNH 96
H GS + + +TSL+WH + A +CQ ++L +H
Sbjct: 657 HYSDATDGSYIEVKETSLVWHYEEADPDFGSCQAKELQDH 696
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 236 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLE 364
Q VL I+ K ++ + P P P +EP+ EP P++
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVK 325
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 86 SGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP-CNDYVNTATRHVLLRQGVLGIKVK 262
SG G + G+ R RA K + + P ++ V T +++ R G L +
Sbjct: 57 SGGGGGRRLRHGRGRRARAFRRKLEEENKNSNNRPRASNVVIAYTPNLIRRYGTLLRNIS 116
Query: 263 IMLPWDQQGK 292
+LP+D QGK
Sbjct: 117 FLLPYDGQGK 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,911,621
Number of Sequences: 37544
Number of extensions: 267026
Number of successful extensions: 945
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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