Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31145
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 192 6e-50
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 30 0.54
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 30 0.54
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 2.9
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 3.8
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 3.8
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical pr... 27 3.8
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 27 3.8
AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Relate... 27 3.8
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 27 5.0
U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 27 6.7
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 27 6.7
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 6.7
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 6.7
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 27 6.7
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 26 8.8
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 26 8.8
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 26 8.8
AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical ... 26 8.8
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 26 8.8
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 26 8.8
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 192 bits (469), Expect = 6e-50
Identities = 86/117 (73%), Positives = 102/117 (87%)
Frame = +2
Query: 14 VRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPC 193
+RYKL+GGLAVRRACYGVLRFIMESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P
Sbjct: 107 LRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPV 166
Query: 194 NDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLE 364
NDY+ A RHV LRQGV+GIKVKIMLP+D +G+NGP+ PDH+ + EP++E +P E
Sbjct: 167 NDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKE 223
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 0.54
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 205 QHCYQTCASQTRSTRNQGQNHVA 273
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 30.3 bits (65), Expect = 0.54
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1
Query: 205 QHCYQTCASQTRSTRNQGQNHVA 273
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 351 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 250
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 351 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 250
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 1647 PEPEPVVISEPVPEPVPI 1664
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 1647 PEPEPVVISEPVPEPVPI 1664
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 468 PEPEPVVISEPVPEPVPI 485
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 468 PEPEPVVISEPVPEPVPI 485
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 1647 PEPEPVVISEPVPEPVPI 1664
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL 361
P+P+ ++++EP EPVP+
Sbjct: 1647 PEPEPVVISEPVPEPVPI 1664
>Z68010-2|CAA92010.2| 433|Caenorhabditis elegans Hypothetical
protein T01C1.2 protein.
Length = 433
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 249 ESRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPS 362
E+ K C T+ A NQ+ S SP S CPS
Sbjct: 215 EAEQKRCVEATAAAALLDAFGNQSDSSSSSPHASMCPS 252
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 218 RHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEG 367
R V +GV + + + W+ G K+PQ ++ V P +P P+ G
Sbjct: 479 RKVHFTEGVRVLDLSVDRQWEFNCTYGDKQPQFAYLPVDVPTVKPTPVRG 528
>AB236333-1|BAE45265.1| 433|Caenorhabditis elegans MBlk-1 Related
factor-1 protein.
Length = 433
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 249 ESRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPS 362
E+ K C T+ A NQ+ S SP S CPS
Sbjct: 215 EAEQKRCVEATAAAALLDAFGNQSDSSSSSPHASMCPS 252
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -3
Query: 199 IIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKL 23
++ R + +E+IY L TT+ FTTT H + NTI+S + + + K+
Sbjct: 89 LVTRNRGISNEAIYVLAKVSATTTKFEFI--FTTTNPASHSKLFNTISSISRAYETTKM 145
>U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical
protein C26F1.6 protein.
Length = 360
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 21 TSLSEVSLYVVLAMVFSVSSWNLVPVVVKLLYLASC 128
T++ V LY V M SVS W LV + + YLA C
Sbjct: 77 TAMIMVYLYPVTIMFQSVSVWLLVSITID-RYLAVC 111
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 164 GLMIHSGDPCNDY 202
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 291 RTARRSHNQTTSW*QSPRTSPCPSR 365
RT R+SHN T SP+ P SR
Sbjct: 656 RTPRKSHNGTNGTNSSPQKQPVSSR 680
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 291 RTARRSHNQTTSW*QSPRTSPCPSR 365
RT R+SHN T SP+ P SR
Sbjct: 656 RTPRKSHNGTNGTNSSPQKQPVSSR 680
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 125 LRGQRAKSMKFVDGLMIHSG 184
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 125 LRGQRAKSMKFVDGLMIHSG 184
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.6 bits (56), Expect = 6.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 164 GLMIHSGDPCNDY 202
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 252 SRSKSCCRGTSKARTARRSHNQTTSW*QSPRTSPCPSR 365
SRS S R S++R RRS ++++S +S SP P R
Sbjct: 208 SRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP-PKR 244
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 285 KARTARRSHNQTTSW*QSPRTSPCPSRGGPVPNSP 389
+ T RR H+QT+S Q PR P P P
Sbjct: 86 RVHTERRHHHQTSSPSQYPRPPSRDRESQPPPTQP 120
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 285 KARTARRSHNQTTSW*QSPRTSPCPSRGGPVPNSP 389
+ T RR H+QT+S Q PR P P P
Sbjct: 86 RVHTERRHHHQTSSPSQYPRPPSRDRESQPPPTQP 120
>AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical
protein C17B7.10 protein.
Length = 561
Score = 26.2 bits (55), Expect = 8.8
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 149 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 301
++ +DGLM DP ++ + + L+R GV + + I D++ + P
Sbjct: 74 LQIIDGLMFQLPDPSDETFSKCSEFKLIRTGVAELFLSIAC--DRRSSHSP 122
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 82 HDETENTIASTTYSETSDKLVSYLVPN 2
H EN I + Y +T+D +Y+ PN
Sbjct: 264 HSRDENAIMAPFYQKTTDSSGNYVYPN 290
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 82 HDETENTIASTTYSETSDKLVSYLVPN 2
H EN I + Y +T+D +Y+ PN
Sbjct: 264 HSRDENAIMAPFYQKTTDSSGNYVYPN 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,646,130
Number of Sequences: 27780
Number of extensions: 213039
Number of successful extensions: 761
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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