Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31140
(453 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 295 8e-81
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 295 1e-80
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 294 2e-80
SB_56| Best HMM Match : Actin (HMM E-Value=0) 294 2e-80
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 294 2e-80
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 292 1e-79
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 228 1e-60
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 7e-28
SB_54| Best HMM Match : Actin (HMM E-Value=0) 113 9e-26
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 69 2e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 2e-11
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 54 4e-08
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.003
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 36 0.021
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.26
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 1.8
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 1.8
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.4
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 4.2
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 4.2
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 5.5
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 27 7.3
SB_22203| Best HMM Match : 7tm_1 (HMM E-Value=8e-08) 27 9.6
SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003) 27 9.6
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 27 9.6
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 295 bits (725), Expect = 8e-81
Identities = 138/150 (92%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 174 DIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 233
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKII
Sbjct: 234 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKII 293
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 294 APPERKYSVWIGGSILASLSTFQQMWISKQ 323
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 295 bits (724), Expect = 1e-80
Identities = 138/150 (92%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEM TAA+S+S+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME
Sbjct: 185 DIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGME 244
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKII
Sbjct: 245 SSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKII 304
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 305 APPERKYSVWIGGSILASLSTFQQMWISKQ 334
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 294 bits (722), Expect = 2e-80
Identities = 137/150 (91%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKII
Sbjct: 272 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKII 331
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQ 361
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 294 bits (722), Expect = 2e-80
Identities = 137/150 (91%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 211 DIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 270
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKII
Sbjct: 271 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKII 330
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQ 360
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 294 bits (722), Expect = 2e-80
Identities = 137/150 (91%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALDFEQEM TAA+S+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKII
Sbjct: 272 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKII 331
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQ 361
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 292 bits (716), Expect = 1e-79
Identities = 137/150 (91%), Positives = 145/150 (96%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKL YVALDFEQEMATAAAS+SLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 211 DIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 270
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHET YNSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKII
Sbjct: 271 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKII 330
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
APPERKYSVWIGGSILA LSTFQQMWISK+
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQ 360
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 228 bits (558), Expect = 1e-60
Identities = 103/130 (79%), Positives = 119/130 (91%)
Frame = +3
Query: 63 AASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIR 242
A S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 243 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAXLS 422
KDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILA LS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 423 TFQQMWISKE 452
TFQQMWI+KE
Sbjct: 125 TFQQMWIAKE 134
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 120 bits (288), Expect = 7e-28
Identities = 51/109 (46%), Positives = 73/109 (66%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES 185
+KEKLCYV + EQE A +T L + Y LPDG+V+ + ERF PEALFQP + +E
Sbjct: 216 MKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEG 275
Query: 186 CGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 332
G+ E ++N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 276 VGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQL 324
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 243 KDLYANTVMSGGTTMYPGIADRMQKEITA-LAPSTIKIKIIAPPERKYSVWIGGSILA-X 416
K LY V+ G T+ Q +TA KI+I PP RK+ V++GG++LA
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
Query: 417 LSTFQQMWISKE 452
+ W++++
Sbjct: 382 MKDKDSFWMTRK 393
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 113 bits (271), Expect = 9e-26
Identities = 50/91 (54%), Positives = 65/91 (71%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
D+KE LCY A+D+E+E+ A S E Y LPDGQ I IG+ERFR E LFQPS LG +
Sbjct: 2256 DLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRD 2315
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSG 275
GIHE+++ SI KCD+D+R +L+ N V+SG
Sbjct: 2316 IDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Frame = +3
Query: 114 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 290
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 291 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILAXLS 422
R+Q++I + P I+ ++I+ ++Y+VW GGS+LA
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 423 TFQQMWISK 449
F + +K
Sbjct: 316 EFYSVCHTK 324
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 174 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 353
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 354 KII---APPERKYSVWIGGSILAXL 419
K+I + E++++ WIGGSILA L
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 54.4 bits (125), Expect = 4e-08
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 173
DIKEK+CY++ D +E+ + L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 842 DIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Frame = +3
Query: 180 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 344
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 345 --IK-IKIIAPP-ERKYSVWIGGSILAXLSTFQQMWISKE 452
IK +K+ PP + W+GG+I L ++E
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSLEVLADRSTTRE 153
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +3
Query: 192 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 296
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEM 53
DIKEKLCYVALDF QE+
Sbjct: 90 DIKEKLCYVALDFYQEI 106
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 144 PEALFQPSFLGMESCGIHETV 206
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.26
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 367
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 368 PREEVLRMDRWIHPG 412
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 164 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 337
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 338 LDHQ 349
H+
Sbjct: 954 RKHE 957
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = +2
Query: 185 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 358
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 359 -HRSPREEVLRMDRWIHPGXPVHLPADVD 442
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = +2
Query: 185 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 364
V H R V H + H V + V +RRQDA+ + QD DH
Sbjct: 634 VDHHRQDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADHH 693
Query: 365 SPREEVLRMD 394
E R D
Sbjct: 694 RQDAEHHRQD 703
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +2
Query: 191 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 364
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 365 SPREEVLRMDRWIHPGXPVH 424
P + +R +HP H
Sbjct: 373 PPEQHHEEEERGVHPPAQHH 392
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAE-GDHRP-RALDHQDQDHRSPREEVLR 388
HHE R P + H H P ++ E G H P + L+ +++ P ++
Sbjct: 307 HHEEEERGVHPPEQHHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEE 366
Query: 389 MDRWIHPGXPVH 424
+R HP H
Sbjct: 367 EERGAHPPEQHH 378
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 406 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 269
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 258 NTVMSGGTTMYPGIADRMQKEITALAP 338
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 355
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 356 DHRSPREEVLRMDRWIH 406
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +2
Query: 143 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 322
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 323 HRPRALDHQ 349
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 388
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 389 MDRWIHPGXPVH 424
+R +HP H
Sbjct: 214 EERGVHPPGQHH 225
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +2
Query: 215 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 388
HHE R P + H H P ++ E P H++++ P +
Sbjct: 126 HHEEEERGAHPPGQHHEEEERGAHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEE 185
Query: 389 MDRWIHPGXPVH 424
+R +HP H
Sbjct: 186 EERGVHPPGQHH 197
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 194 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 364
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 374
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 367
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 368 PREEVLRMDRWIH 406
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 367
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 368 PREEVLRMDRWIH 406
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 9 KEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPE 149
+EK+ L+ E E A + LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +2
Query: 185 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 364
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 365 SPREE 379
R+E
Sbjct: 606 DQRDE 610
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 218 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 316
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 149 GSLPAFLP-GYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDA 313
G++ +LP GI + + + H R+H P R HR+ R + +P RY R+ A
Sbjct: 185 GNMQRYLPESIGIPGNMQRYLTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHA 244
Query: 314 E 316
+
Sbjct: 245 K 245
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 255 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 374
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +2
Query: 176 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 325
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 281 HHVPRYRRQDAEGDHRPRALDHQDQDH---RSPREEVLRMDRWIHPGXPVHLP 430
HH +R +++ D R R+ D++ Q H R REE + P P+ P
Sbjct: 172 HHHSDHRDEESHRDGRKRSKDYEKQHHNDRRLSREEGSYREGHRSPSQPLFQP 224
>SB_22203| Best HMM Match : 7tm_1 (HMM E-Value=8e-08)
Length = 479
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 254 RQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVL 385
RQ R VR H VPR +R PR H+ PR++ L
Sbjct: 289 RQQRLVRSTHQVPRQQRLVRSTHQVPRQQRLVRSTHQVPRQQRL 332
Score = 26.6 bits (56), Expect = 9.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 254 RQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVL 385
RQ R VR H VPR +R PR H+ PR++ L
Sbjct: 302 RQQRLVRSTHQVPRQQRLVRSTHQVPRQQRLVRSTHQVPRQQRL 345
>SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 26.6 bits (56), Expect = 9.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 332 RALDHQDQDHRSPREEVLRMDRWI 403
+ LDH+ + H ++E+ R+ +WI
Sbjct: 62 KELDHKSELHSKQKKEIKRLKKWI 85
>SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003)
Length = 369
Score = 26.6 bits (56), Expect = 9.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +2
Query: 332 RALDHQDQDHRSPREEVLRMDRWI 403
+ LDH+ + H ++E+ R+ +WI
Sbjct: 62 KELDHKSELHSKQKKEIKRLKKWI 85
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 215 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQ 307
HH R RH +HRH +HH Y R+
Sbjct: 324 HHHQRHRHR----HRHRHRHHHHHHHEYNRR 350
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,771,169
Number of Sequences: 59808
Number of extensions: 259234
Number of successful extensions: 1004
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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