Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31140
(453 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 271 2e-73
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 271 2e-73
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 269 5e-73
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 266 4e-72
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 265 1e-71
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 265 1e-71
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 259 7e-70
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 258 2e-69
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 254 2e-68
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 251 1e-67
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 235 1e-62
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 211 1e-55
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 134 3e-32
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 123 7e-29
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 89 1e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 97 4e-21
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 89 2e-18
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 66 1e-11
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 2e-09
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 46 9e-06
At5g43500.2 68418.m05318 expressed protein 44 6e-05
At5g43500.1 68418.m05319 expressed protein 44 6e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.039
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 1.1
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 3.4
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 4.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 4.5
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 4.5
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 5.9
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 5.9
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 5.9
At2g06010.1 68415.m00657 expressed protein 27 5.9
At4g10290.1 68417.m01692 hypothetical protein 27 7.8
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 7.8
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 27 7.8
At2g45750.1 68415.m05691 dehydration-responsive family protein s... 27 7.8
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 271 bits (664), Expect = 2e-73
Identities = 121/149 (81%), Positives = 138/149 (92%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME
Sbjct: 213 DIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++
Sbjct: 273 NAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWI+K
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWIAK 361
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 271 bits (664), Expect = 2e-73
Identities = 121/149 (81%), Positives = 138/149 (92%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCY+ALD+EQE+ TA S+S+EK+YELPDGQVITIG+ERFRCPE L+QPS +GME
Sbjct: 213 DIKEKLCYIALDYEQELETAKTSSSVEKNYELPDGQVITIGSERFRCPEVLYQPSMIGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++
Sbjct: 273 NAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWI+K
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWIAK 361
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 269 bits (660), Expect = 5e-73
Identities = 122/149 (81%), Positives = 136/149 (91%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
D+KEKL Y+ALD+EQEM TA S+S+EKSYELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 213 DVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++
Sbjct: 273 AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWI+K
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWIAK 361
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 266 bits (653), Expect = 4e-72
Identities = 122/149 (81%), Positives = 137/149 (91%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKL YVALD+EQE+ TA +S+S+EK+YELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 213 DIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++
Sbjct: 273 APGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWISK
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWISK 361
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 265 bits (649), Expect = 1e-71
Identities = 121/149 (81%), Positives = 136/149 (91%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME
Sbjct: 213 DIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++
Sbjct: 273 AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWISK
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWISK 361
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 265 bits (649), Expect = 1e-71
Identities = 121/149 (81%), Positives = 136/149 (91%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME
Sbjct: 213 DIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++
Sbjct: 273 AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWISK
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWISK 361
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 259 bits (634), Expect = 7e-70
Identities = 118/149 (79%), Positives = 134/149 (89%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
D+KEKL Y+ALDFEQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 213 DMKEKLSYIALDFEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++
Sbjct: 273 NPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWI+K
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWIAK 361
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 258 bits (631), Expect = 2e-69
Identities = 117/149 (78%), Positives = 134/149 (89%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
D+KEKL Y+ALD+EQE+ T+ S+S+EKS+ELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 213 DMKEKLSYIALDYEQELETSKTSSSVEKSFELPDGQVITIGAERFRCPEVLFQPSMIGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++
Sbjct: 273 NPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQMWI+K
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQMWIAK 361
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 254 bits (623), Expect = 2e-68
Identities = 117/149 (78%), Positives = 134/149 (89%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKL +VA+D+EQEM T+ S+S+EK+YELPDGQVITIG ERFRCPE LFQPSF+GME
Sbjct: 213 DIKEKLSFVAVDYEQEMETSKTSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSFVGME 272
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++
Sbjct: 273 AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVV 332
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LSTFQQ+ I +
Sbjct: 333 APPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 251 bits (615), Expect = 1e-67
Identities = 111/149 (74%), Positives = 131/149 (87%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCY+A+D+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQ S +GME
Sbjct: 214 DIKEKLCYIAVDYEQEMEKATTSSAIDRTYELPDGQVITIGAERFRCPEVLFQTSLIGME 273
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHET YNSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++
Sbjct: 274 TSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVV 333
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVW+GGSILA LS+F MWI+K
Sbjct: 334 APPERKYSVWVGGSILASLSSFAPMWITK 362
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 235 bits (575), Expect = 1e-62
Identities = 106/149 (71%), Positives = 127/149 (85%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKE+ Y+ALD+EQEM A S++++++YELPDGQVITIG ERFRCPE LFQPS +GME
Sbjct: 165 DIKEQFGYIALDYEQEMEKATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGME 224
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ GIHE YNSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+
Sbjct: 225 TSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIV 284
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISK 449
APPERKYSVWIGGSILA LST++QMWI+K
Sbjct: 285 APPERKYSVWIGGSILASLSTYEQMWITK 313
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 211 bits (516), Expect = 1e-55
Identities = 95/150 (63%), Positives = 116/150 (77%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
DIKEKLCYVALD+EQEM +++K+Y LPDGQ ITI ERF CPE LFQPS +G E
Sbjct: 202 DIKEKLCYVALDYEQEMEKTTKGWTIDKTYVLPDGQEITIEAERFMCPEVLFQPSVIGKE 261
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
S GIHE NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++
Sbjct: 262 SSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVV 321
Query: 363 APPERKYSVWIGGSILAXLSTFQQMWISKE 452
PPE + SVWIGGSILA LSTF QMWI+K+
Sbjct: 322 VPPESECSVWIGGSILASLSTFHQMWITKD 351
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 134 bits (323), Expect = 3e-32
Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 12/162 (7%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 182
+IKEKLCY++ D+++E +T L K+Y LPDG+VI +G ERF+ PEALF P + +E
Sbjct: 212 EIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVE 271
Query: 183 SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS- 341
G+ + V+ I + D+D R LY + V+SGG+TMYPG+ R++KEI T L +
Sbjct: 272 GDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNK 331
Query: 342 ----TIKIKIIAPPERKYSVWIGGSILA-XLSTFQQMWISKE 452
++++I PP RK+ V++GG++LA + + WI++E
Sbjct: 332 DGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINRE 373
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 123 bits (296), Expect = 7e-29
Identities = 66/164 (40%), Positives = 102/164 (62%), Gaps = 15/164 (9%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL--- 173
DIK+ +C V + + + T+ SYELPDGQ + IG +RF+ P+ +F PS +
Sbjct: 265 DIKDSICRVPDTPYDDKSYSNIPTT---SYELPDGQTLEIGADRFKVPDVMFNPSIVQTI 321
Query: 174 -GMESC--------GIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEIT 326
GME G+ V SI KCDVDIR++LY++ +++GGT+ + +R++K++
Sbjct: 322 PGMEKYAEMIPSVRGLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLI 381
Query: 327 ALAPSTIKIKIIA---PPERKYSVWIGGSILAXLSTFQQMWISK 449
+P + ++K++A ER++SVWIGGSILA L +FQQMW SK
Sbjct: 382 EESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSK 425
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 89.0 bits (211), Expect(2) = 1e-23
Identities = 40/112 (35%), Positives = 65/112 (58%)
Frame = +3
Query: 114 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 293
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 294 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILAXLSTFQQMWISK 449
+ +R++ E+ L P +KI + VW GGS+LA F+ M ++K
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTK 404
Score = 37.5 bits (83), Expect(2) = 1e-23
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 3 DIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQVITIG 125
D KEKLC+V+LD +++ A +L KS Y LPDG T G
Sbjct: 213 DAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVTHTKG 254
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 97.5 bits (232), Expect = 4e-21
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Frame = +3
Query: 42 EQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 221
E E+A + + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I
Sbjct: 207 EDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIIS 266
Query: 222 KCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKY 383
+ + L NTV+ GGTT G R QKE L S I+ ++ PPE Y
Sbjct: 267 TVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMY 325
Query: 384 SVWIGGSILAXLSTFQQMWISK 449
S W+GG+ILA + Q ++K
Sbjct: 326 SAWVGGAILAKVVFPQNQHVTK 347
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 88.6 bits (210), Expect = 2e-18
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 5/150 (3%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES 185
+KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP GM +
Sbjct: 312 LKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGMRA 366
Query: 186 CGIHETVYNSIMKCD-VDIRKD--LYANTVMSGGTTMYPGIADRMQKEITALAPSTIK-- 350
+H+ V + CD + D + V++GG+ PG+++R+++E+ PS+I
Sbjct: 367 MSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERELQDHLPSSISNG 426
Query: 351 IKIIAPPERKYSVWIGGSILAXLSTFQQMW 440
I++I PP + W G +++ LS F W
Sbjct: 427 IRVIPPPYGVDTSWHGAKLISNLSIFPGPW 456
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 65.7 bits (153), Expect = 1e-11
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Frame = +3
Query: 114 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 284
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 285 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 413
+ PG+ +R++ I + P I ++ + W G S A
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEM----ATAAASTSLEKSYELPDGQVIT--IGNERFRCPEALFQPS 167
+KE CY D +E A K + G T +G ERF PE F P
Sbjct: 236 VKEMYCYTCSDIVKEFNKHDKEPAKYIKQWKGVKPKTGAPYTCDVGYERFLGPEVFFNPE 295
Query: 168 FLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPS- 341
+ + + + I +D R+ LY N V+SGG+TM+ R+Q+++ + +
Sbjct: 296 IYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDAR 355
Query: 342 ---------------TIKIKIIAPPERKYSVWIGGSILAXLSTFQQMWISKE 452
+++ +++ P ++++VW GGS+L+ F +KE
Sbjct: 356 VLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKE 407
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 46.4 bits (105), Expect = 9e-06
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 6 IKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMES 185
+KEKLCYVALD++ E+ S + S E+ T+ ERF+ E LFQP G+
Sbjct: 312 LKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKERFQTGEILFQPRLAGII- 365
Query: 186 CGIHETVY 209
+H+ VY
Sbjct: 366 --VHKLVY 371
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 43.6 bits (98), Expect = 6e-05
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 180 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 356
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 357 II----APPERKYSVWIGGSILAXLSTFQQMWISK 449
+ + E ++ W GG+IL L ++ WI +
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIER 552
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 43.6 bits (98), Expect = 6e-05
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 180 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 356
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 357 II----APPERKYSVWIGGSILAXLSTFQQMWISK 449
+ + E ++ W GG+IL L ++ WI +
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIER 564
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.039
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +3
Query: 192 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 371
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 372 ERKYS 386
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +3
Query: 192 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 371
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 372 ERKYS 386
ERK++
Sbjct: 394 ERKHA 398
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -3
Query: 307 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 152
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 361
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 188 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 361
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 229 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 95
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 264 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 264 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 362
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -3
Query: 307 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 152
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 182 FHTQEGRLEESLGTTEPLVTDGDHL 108
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 244 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 155
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 302 RQDAEGDHRPRALDHQDQDHRSPREE 379
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +2
Query: 197 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPRE 376
RDR + H RR ++H + R R+ + D++ + D D+ + PR
Sbjct: 639 RDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSREKSSSDYKTKRDDPYDRRSQQPRN 698
Query: 377 EVLRMDRWI 403
+ L DR+I
Sbjct: 699 QNLFEDRYI 707
>At2g45750.1 68415.m05691 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 631
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 353 QDHRSPREEVLRMDRWIHPGXPVHLPADVDL 445
Q P E +L MDR + PG V + DVD+
Sbjct: 547 QGQCEPEEILLEMDRILRPGGGVIIRDDVDV 577
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,828,505
Number of Sequences: 28952
Number of extensions: 174091
Number of successful extensions: 657
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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