Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31138
(784 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 103 2e-22
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 102 4e-22
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 3e-21
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 87 2e-17
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 75 7e-14
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 68 7e-12
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 66 2e-11
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 50 2e-06
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 50 3e-06
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 50 3e-06
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 46 3e-05
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 46 3e-05
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 42 7e-04
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 36 0.049
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 32 0.60
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 32 0.60
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 31 0.80
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14117| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-25) 31 1.4
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 30 1.8
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 30 2.4
SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16) 30 2.4
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 29 3.2
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1) 29 3.2
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 4.2
SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 4.2
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10) 29 4.2
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 4.2
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 29 4.2
SB_44729| Best HMM Match : SET (HMM E-Value=0) 29 5.6
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 29 5.6
SB_5367| Best HMM Match : wnt (HMM E-Value=0) 29 5.6
SB_23296| Best HMM Match : Glyco_hydro_2_N (HMM E-Value=4.2e-24) 28 7.4
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 28 9.8
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9) 28 9.8
SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16) 28 9.8
SB_5380| Best HMM Match : zf-CXXC (HMM E-Value=2.9) 28 9.8
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 103 bits (247), Expect = 2e-22
Identities = 44/120 (36%), Positives = 61/120 (50%)
Frame = +1
Query: 91 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
+C +C+K I G++ TAL K WHPEHF C C P+ F + + +C + +PR
Sbjct: 281 MCAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPR 340
Query: 271 CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRC 450
C C PI D + AL +WH HFV F E+ G+P+C + Y FA RC
Sbjct: 341 CAYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYYAMFAPRC 400
Score = 100 bits (240), Expect = 1e-21
Identities = 42/107 (39%), Positives = 53/107 (49%)
Frame = +1
Query: 271 CHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRC 450
C C PI +V ALG +WH HF F E+ G+PYC Y D FA RC
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRC 341
Query: 451 KGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 591
C PI+D + ALD WH + F C +C NP D+ F + +P C
Sbjct: 342 AYCNGPILDSCVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFC 388
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 102 bits (244), Expect = 4e-22
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Frame = +1
Query: 91 VCNSC--DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHS 264
VC +C D + V +K +H + F+C+ C++PI +F + + C CF +
Sbjct: 175 VCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKFA 234
Query: 265 PRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 444
C C I +Q G ++H+ F F +Q GR C +CY +++A
Sbjct: 235 KVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAK 294
Query: 445 RCKGCGNPIV-DKAIIALDAKW-HRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
RC C N I + +A D K+ HR+CFTC KC P+ F + + + +C C
Sbjct: 295 RCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +1
Query: 448 CKGCGNPIV--DKAIIAL----DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 591
CK C P+ D A+ A D+ WH CFTC + + D + +++ C
Sbjct: 80 CKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDDEIYC 133
Score = 27.9 bits (59), Expect = 9.8
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 8/145 (5%)
Frame = +1
Query: 151 WHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSW 330
WH + F C + + + ++ ++C + + PRC GC + ++ +
Sbjct: 105 WHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWGEKLKPRCAGCEEMNEGFTLKDEKLIC 164
Query: 331 HAHHFVXXXXXXXXXXXXFMEQAGR-PYCSDCYADKFATRCKGCGNPIVDKAIIALD-AK 504
H + F + Y S + DK C C PI K I D +
Sbjct: 165 HGCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDK-CFICDECKQPIGSKQFIRRDERR 223
Query: 505 WHRDCF------TCMKCRNPVTDST 561
+CF C+KC + S+
Sbjct: 224 LCNNCFDSKFAKVCVKCNQVIKTSS 248
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Frame = +1
Query: 94 CNSCDKVI--QGRIVTALNKK-WHPEHFVCNTCRKPIDG-AKFHQHNNGVHCVPCFTKHH 261
C +C + I + R +++ + + WH + F+C+ CR+P+ KF + + + C C+ ++
Sbjct: 339 CEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANY 398
Query: 262 SPRCHGCGDPITDRV--IQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADK 435
C CG I ++ G WH + F F+ + +C CY K
Sbjct: 399 QKECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSK 458
Query: 436 FATRCKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
F+ RC CG P+++ ++ WH+ CF+C C + + FSV + C +C
Sbjct: 459 FSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 513
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Frame = +1
Query: 151 WHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSW 330
WH F C C + I + F ++ C C+ S RC CG+P+ + + G +W
Sbjct: 423 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETW 482
Query: 331 HAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAIIAL-DAKW 507
H F F + G YC +CY +A +C+ C IV L ++ +
Sbjct: 483 HKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYTLEESNF 542
Query: 508 HRDCFTCMKCRNPVTDSTFSVMENQPLCGKCA 603
H++CF C +C + F ++ LCG CA
Sbjct: 543 HKECFMCSRCGRSLASEGFVREGDELLCGDCA 574
Score = 74.5 bits (175), Expect = 9e-14
Identities = 42/170 (24%), Positives = 62/170 (36%), Gaps = 7/170 (4%)
Frame = +1
Query: 112 VIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGD- 288
+ G A+NK WH HF C TC I G +F + C CF ++ C C
Sbjct: 286 IFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSYAHECEACHQK 345
Query: 289 --PITDRVIQALGVSWHAHHFV-XXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGC 459
P + + WH F+ F + C++CY + C C
Sbjct: 346 IGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYVANYQKECFAC 405
Query: 460 GNPIVDKAIIALDAK---WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
G ++D L+ WH +CF C C + S F ++ C C
Sbjct: 406 GQ-MIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGC 454
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +1
Query: 94 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRC 273
C SC + + V + WH F C C + + A F + +C+ C+ K ++ +C
Sbjct: 463 CASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQC 522
Query: 274 HGCGDPITDRVIQALGVS-WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDC 423
C I L S +H F+ F+ + C DC
Sbjct: 523 EICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 573
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 99.1 bits (236), Expect = 4e-21
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Frame = +1
Query: 91 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
+CNSC K I +V NK H E FVC CR P+ G F ++ C C H++ R
Sbjct: 1 ICNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKVCKDCNRIHYAKR 60
Query: 271 CHGCGDPI--TDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 444
C C I T + + ++H+ FV F E G C DCY D++A
Sbjct: 61 CVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAK 120
Query: 445 RCKGCGNPI-VDKAIIALDAK-WHRDCFTCM--KCRNPVTDSTFSV-MENQPLCGKC 600
RC C + + + D K +H +CF C +CR P++ + F++ + + +C C
Sbjct: 121 RCNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMCLNC 177
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Frame = +1
Query: 151 WHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSW 330
WH F C C + I + F ++ C C+ S RC CG+P+ + + G +W
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNGETW 70
Query: 331 HAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAIIAL-DAKW 507
H F F + G YC +CY +A +C+ C IV L ++ +
Sbjct: 71 HKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKAIVGGEYYTLEESNF 130
Query: 508 HRDCFTCMKCRNPVTDSTFSVMENQPLCGKCA 603
H++CF C +C + F ++ LCG CA
Sbjct: 131 HKECFMCSRCGRSLASEGFVREGDELLCGDCA 162
Score = 65.7 bits (153), Expect = 4e-11
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +1
Query: 319 GVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAIIALD 498
G WH + F F+ + +C CY KF+ RC CG P+++ ++
Sbjct: 8 GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNG 67
Query: 499 AKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
WH+ CF+C C + + FSV + C +C
Sbjct: 68 ETWHKACFSCYFCHRSLASAAFSVRDGCRYCMEC 101
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 1/111 (0%)
Frame = +1
Query: 94 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRC 273
C SC + + V + WH F C C + + A F + +C+ C+ K ++ +C
Sbjct: 51 CASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQC 110
Query: 274 HGCGDPITDRVIQALGVS-WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDC 423
C I L S +H F+ F+ + C DC
Sbjct: 111 EICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Frame = +1
Query: 151 WHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGDPI-TDRVIQALGVS 327
WH F+C TC++ + + ++ V+C + PRC C + I ++ +A
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSC 162
Query: 328 WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPI-VDKAIIALDAK 504
WH HF ++ + +PYC C+ +A C CG PI D + +A + +
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEFCDSCGEPIEPDASQMAHNGQ 222
Query: 505 -WH--RDCFTCMKCRNPVTDSTFSVMENQPLC 591
WH +CF+C C + F + C
Sbjct: 223 HWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Frame = +1
Query: 94 CNSCDKVIQGRIVT-ALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
C +CD++I T A + WH +HF C C P+ G ++ +N +C CF ++
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYCCHCFESLYAEF 202
Query: 271 CHGCGDPITDRVIQAL--GVSWHAHH--FVXXXXXXXXXXXXFMEQAGRPYCS-DC 423
C CG+PI Q G WHA + F F+ ++G YCS DC
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYCSPDC 258
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 328 WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPI-VDKAIIALDAK 504
WHA F+ + + + YC +A+ RC C I ++ A D+
Sbjct: 103 WHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAETLKPRCAACDEIIFAEQCTEAEDSC 162
Query: 505 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
WH F C +C P+ + + +N+P C C
Sbjct: 163 WHVQHFCCFECDCPLGGMRYVMRDNKPYCCHC 194
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +1
Query: 406 PYCSDCYADKFATRCKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVMENQP 585
P S+ Y+ K C G+ V + WH CF C C+ + D + +++
Sbjct: 70 PEMSEGYSCKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKV 129
Query: 586 LCGK 597
CG+
Sbjct: 130 YCGR 133
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 70.1 bits (164), Expect = 2e-12
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 10/131 (7%)
Frame = +1
Query: 109 KVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNN------GVHCV----PCFTKH 258
K + GR++ A+ WHP+ F C C + F ++ G H + P H
Sbjct: 19 KFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWH 78
Query: 259 HSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKF 438
++ C CG P+ DRV+ ALG +WH HFV + E+ G YC Y + +
Sbjct: 79 YN--CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELY 136
Query: 439 ATRCKGCGNPI 471
C C I
Sbjct: 137 GDICFECNKAI 147
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +1
Query: 94 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRC 273
C C + ++ R+V AL K WH EHFVC C KP G ++++ +C + + + C
Sbjct: 81 CFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGDIC 140
Query: 274 HGCGDPIT 297
C IT
Sbjct: 141 FECNKAIT 148
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Frame = +1
Query: 283 GDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSD----CY----ADKF 438
G + RVI+A+ +WH F F++ AG Y + Y +
Sbjct: 18 GKFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPW 77
Query: 439 ATRCKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNP 546
C CG P+ D+ + AL WH + F C KC P
Sbjct: 78 HYNCFCCGRPVEDRVVHALGKAWHVEHFVCAKCEKP 113
Score = 36.3 bits (80), Expect = 0.028
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 460 GNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTF 564
G ++ + I A+ A WH DCF C C + + D+ F
Sbjct: 18 GKFVIGRVIKAMQANWHPDCFRCEICNDCLADTGF 52
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 68.1 bits (159), Expect = 7e-12
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 91 VCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTK 255
+C SC K I GR +TA+++K+HPEHFVC C K ++ F + N+ +C PCF K
Sbjct: 24 LCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVK 78
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = +1
Query: 385 FMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAIIALDAKWHRDCFTCMKCRNPVTDSTF 564
F + GRPYC Y K T C C PI + I A+ K+H + F C C + TF
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 565 SVMENQPLCGKC 600
++P C C
Sbjct: 64 KEQNDKPYCHPC 75
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = +1
Query: 208 FHQHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXF 387
F H+ +C + C+ C PIT R I A+ +H HFV F
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 388 MEQAGRPYCSDCYADKF 438
EQ +PYC C+ F
Sbjct: 64 KEQNDKPYCHPCFVKLF 80
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 142 NKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCHGCGDPI-TDRVIQAL 318
+K WHP FVC C + + + ++C + + PRC C + I ++ QA
Sbjct: 331 DKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQAE 390
Query: 319 GVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKA 483
+WH HF ++ + G+P+C +CY +A C C I A
Sbjct: 391 DRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKHCMSCKKNIAADA 445
Score = 51.6 bits (118), Expect = 7e-07
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 94 CNSCDKVIQGRIVT-ALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
C +CD++I T A ++ WH HF C C + + G + HC+ C+ K+++
Sbjct: 374 CAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYYAKH 433
Query: 271 CHGC 282
C C
Sbjct: 434 CMSC 437
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +1
Query: 328 WHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATRCKGCGNPIVDKAII-ALDAK 504
WH FV + + G YC YA++F RC C I + A D
Sbjct: 334 WHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAEQFKPRCAACDELIFSETYTQAEDRN 393
Query: 505 WHRDCFTCMKCRNPVTDSTFSVMENQPLCGKC 600
WH+ F C++C + + QP C +C
Sbjct: 394 WHQRHFCCLECDRDLGGQLYVARGGQPHCLEC 425
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = +1
Query: 448 CKGCGNPIV--DKAIIAL----DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 597
C C P++ + A+ A D WH CF C C N + D + + CG+
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGR 364
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 62.5 bits (145), Expect = 4e-10
Identities = 41/143 (28%), Positives = 57/143 (39%), Gaps = 12/143 (8%)
Frame = +1
Query: 94 CNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGA-KFHQHNNGVHCVPC-------F 249
C+SC ++G I++ K +H F CN+CR+P + K C C
Sbjct: 19 CDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDYLCQTCNNAPKAPT 78
Query: 250 TKHHSP---RCHGCGDPIT-DRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCS 417
TK SP C GCG+ I + + AL WH F +M G+PYC
Sbjct: 79 TKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCF-SCTKCHCLLSLEYMGMDGKPYCE 137
Query: 418 DCYADKFATRCKGCGNPIVDKAI 486
Y + F C C I K +
Sbjct: 138 KDYQELFGVTCAACNGYITGKVL 160
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Frame = +1
Query: 232 HCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPY 411
+C + + +C C + +I G ++H F + G Y
Sbjct: 6 YCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDY 65
Query: 412 -CSDCY-ADKFATR---------CKGCGNPIV-DKAIIALDAKWHRDCFTCMKCRNPVTD 555
C C A K T C GCG I +A++AL+ +WH CF+C KC + +
Sbjct: 66 LCQTCNNAPKAPTTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKC-HCLLS 124
Query: 556 STFSVMENQPLCGK 597
+ M+ +P C K
Sbjct: 125 LEYMGMDGKPYCEK 138
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 409 YCSDCYADKFATRCKGCGNPIVDKAIIALDAK-WHRDCFTCMKCRNPVTDSTFSVMENQP 585
YC D Y +++ +C C ++ II++ K +H CF C CR P S +
Sbjct: 6 YCKDDYQNQYGKKCDSC-QLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTD 64
Query: 586 -LCGKC 600
LC C
Sbjct: 65 YLCQTC 70
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Frame = +1
Query: 268 RCHGCGDPITDR-VIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 444
+C GC PI D+ +++ L WHA F + G+ +C + ++ T
Sbjct: 4 QCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSRE-GKLFCKTDFYRRYGT 62
Query: 445 RCKGCGNPIVDKAII--ALDAKWHRDCFTCMKCRNPVT--DSTFSVMENQPLC 591
+C GC I ++ A +H DCF C C+ +T D + + + +C
Sbjct: 63 KCSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFIC 115
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = +1
Query: 271 CHGCGDPITDR-VIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFATR 447
C GC +PI DR +++ + +WH F + + YC Y F T+
Sbjct: 46 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKDR-KLYCRTDYEKVFGTK 104
Query: 448 CKGCGNPIVDKAII--ALDAKWHRDCFTCMKCRNPV-TDSTFSVMENQPLC 591
C GC I ++ AL +H CF C C + + F++ +N+ C
Sbjct: 105 CSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYC 155
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 400 GRPYCSDCYADKFATRCKGCGNPIVDKAII-ALDAKWHRDCFTCMKCRNPVTDSTFS 567
G+P +C + C GC PI D+ ++ +D WH C C CR+ ++ S FS
Sbjct: 32 GKP--QNCGQNGRVNICTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFS 86
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 5/113 (4%)
Frame = +1
Query: 268 RCHGCGDPITDR-VIQALGVSWHAHHF-VXXXXXXXXXXXXFMEQAGRPYCSDCYADKFA 441
RC GC I DR +++ G +WH + G+ YC YA +F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFG 160
Query: 442 TRCKGCGNPI--VDKAIIALDAKWHRDCFTCMKCRNPV-TDSTFSVMENQPLC 591
T+C CG I D A + +H CF C C+ + T F++ + LC
Sbjct: 161 TKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLC 213
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 271 CHGCGDPITDR-VIQALGVSWHAHHFVXXXXXXXXXXXX--FMEQAGRPYCSDCYADKFA 441
C C +PI+D+ V+QALG WH +A C Y F
Sbjct: 17 CRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFG 76
Query: 442 TR--CKGCGNPIVDKAII--ALDAKWHRDCFTCMKCRNP-VTDSTFSVMENQPLC-GKCA 603
C C PI ++ A + +H +CF C +CR V F +N+ LC +CA
Sbjct: 77 IPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLCLDRCA 136
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 85 PAVCNSCDKVIQG--RIVTALNKKWHPEHFVCNTCRKP-IDGAKFHQHNNGVHCV 240
P VC+ C+K I ++ A N +H E F C CRK + G F H+N V C+
Sbjct: 78 PGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLCL 132
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 94 CNSCDKVI-QGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
C C K + + A+ KKWH C C K +D + ++C C+ K+ P+
Sbjct: 10 CPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGPK 69
Query: 271 CHGCG 285
+G G
Sbjct: 70 GYGYG 74
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 445 RCKGCGNPIVD-KAIIALDAKWHRDCFTCMKCRNPVTDST 561
+C C + + +A+ KWH+ C TC KC N DST
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTC-KCCNKSLDST 47
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/66 (24%), Positives = 22/66 (33%)
Frame = +1
Query: 265 PRCHGCGDPITDRVIQALGVSWHAHHFVXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 444
PRC +R+ A+G WH ++ G YC CY F
Sbjct: 11 PRCSKTVYKAEERL--AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNFGP 68
Query: 445 RCKGCG 462
+ G G
Sbjct: 69 KGYGYG 74
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 415 SDCYADKFATRCKGCGNPIVDKA-IIALDAKWHRDCFTCMKC 537
+D DK C GCG+ I+++ ++A+D +WH DC C C
Sbjct: 237 ADQMGDKQQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDC 278
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Frame = +1
Query: 271 CHGCGDPITDRV-IQALGVSWHAHHF-VXXXXXXXXXXXXFMEQAGRPYCSDCYADKFAT 444
C GCG I +R + A+ WHA + G C + Y +F+
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRFSV 307
Query: 445 R-CKGCGNPIVDKAII--ALDAKWHRDCFTCMKCR 540
+ C C I K ++ A D +H +CF C +C+
Sbjct: 308 KKCSSCSQAISSKELVMRARDQVYHVNCFACDRCK 342
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 35.5 bits (78), Expect = 0.049
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 94 CNSC-DKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPR 270
C C D V V+ N K+H + F C CRK +D H+ H T+ R
Sbjct: 44 CPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGKCH-TTIVTQRRLSR 102
Query: 271 C 273
C
Sbjct: 103 C 103
Score = 34.7 bits (76), Expect = 0.085
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 421 CYADKFATRCKGCGNPIVDKAIIALDA-KWHRDCFTCMKCRNPVTDSTFSVMENQPLCGK 597
C AD +C CG+ + ++++ K+H+ CF+C CR + DST + + GK
Sbjct: 36 CVADNMP-KCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKL-DSTNAASHD----GK 89
Query: 598 C 600
C
Sbjct: 90 C 90
Score = 31.5 bits (68), Expect = 0.80
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 484 IIALDAKWHRDCFTCMKCRNPVTDSTFSV 570
++ WH+ CF C KC + +T +V
Sbjct: 231 VLGAGFNWHKSCFNCYKCHKKLDSTTVAV 259
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = -2
Query: 462 SAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVVSVPRHAKSLDHTVSDGVA 283
+AP A + LV A A + L P T LA+TA E + P + + T +
Sbjct: 657 TAPEATTASLVTTAPEATTASLLTTAPETTTASLATTAPEATTAPEATTAPEATTAS--L 714
Query: 282 ASMAPRAVMFGEAGHAMDPVVVLVKLSSVDRLTASV 175
A+ AP A A A + + ++ + TAS+
Sbjct: 715 ATTAPEATTASLATTAPETTTASLATTAPETTTASL 750
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = -2
Query: 462 SAPLAASGELVCVAVGAIGTASLFHEPSTAKLLLASTADEVVSVPRHAKSLDHTVSDGVA 283
+AP AA+ LV A A + L P T L +TA E + + + T +
Sbjct: 290 TAPEAATASLVTTAPEATTASLLTTAPETTTASLVTTAPEATTASLVTTAPETTTAS--L 347
Query: 282 ASMAPRAVMFGEAGHAMDPVVVLVKLSSVDRLTASVA 172
A+ AP A A + L+ ++ + TAS+A
Sbjct: 348 ATTAPETTTASLATTAPETTTALLVTTAPETATASLA 384
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 31.9 bits (69), Expect = 0.60
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 64 MSTKVEAPAVCNSCDKVIQGRIVTAL-NKKWHPEHFVCNTCRKPID 198
MS+K C CDK + AL +H F C TC K +D
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLD 47
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 445 RCKGCGNPIVDKAIIALDAKWHRDCFTCMKC 537
RC CG DK +A +K H FTC KC
Sbjct: 91 RCPTCGIVCSDKKQLAKHSKTHLKTFTCKKC 121
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 31.5 bits (68), Expect = 0.80
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +1
Query: 94 CNSCDKVIQGR--IVTALNKKWHPEHFVCNTCRKP-IDGAKFHQHNNGVHC 237
C C K+I ++ L K +H F C TC + G +FH N + C
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFC 758
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Frame = +1
Query: 391 EQAGRPYCSDCYADKFATRCKGCGN--PIVDKAIIALDAKWHRDCFTCMKCRNP-VTDST 561
E GR Y + A C C P + + L +H CFTC C N V
Sbjct: 691 ESNGRTTTYKLYGNSGA--CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDR 748
Query: 562 FSVMENQPLC 591
F V+ + C
Sbjct: 749 FHVVNGRLFC 758
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 31.5 bits (68), Expect = 0.80
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 424 YADKFATRCKGCGNPI-VDKAIIALDAK--WHRDCFTCMKC 537
+ D+ T C C PI A+ + K WH DCF+C+ C
Sbjct: 2024 HGDRNVT-CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVC 2063
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 442 TRCKGCGNPI-VDKAIIALDAKWHRDCFTCMKCRNPVTDSTFSVM-ENQPLC 591
T C CG + + + ++A +HR CF C +C + + T++ E++ C
Sbjct: 609 TACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESESFC 660
>SB_14117| Best HMM Match : 7tm_2 (HMM E-Value=2.4e-25)
Length = 294
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -3
Query: 578 FSITENVESVTGFLHFMHVKQSRCHLASSAMMALS 474
FS+ + +V ++ FM++KQ +C + + M AL+
Sbjct: 21 FSLAGEILTVAAYIAFMNIKQEQCQIRVNLMFALA 55
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 511 RDCFTCMKCRNPVTDSTFSVMENQPLCGK 597
RDCFT C P TD+ ++N P C +
Sbjct: 2269 RDCFTGSNCPGPRTDTKKCKVQNCPTCSQ 2297
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 511 RDCFTCMKCRNPVTDSTFSVMENQPLCGK 597
RDCFT C P TD+ ++N P C +
Sbjct: 247 RDCFTGSNCPGPRTDTKKCKVQNCPTCSQ 275
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 499 AKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 591
A WH+ CF C C + T+ + P C
Sbjct: 211 AVWHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +1
Query: 79 EAPAVCNSCDKV--IQGRIVTALNKKWHPEHFVCNTCRK 189
E P C CDK I+G + + + + +VC TC K
Sbjct: 430 EQPFKCTYCDKAFSIKGNLTVHIRRHTNERPYVCTTCGK 468
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 399 SLFHEPSTAKLLLASTADEVVSVPRHAKSLD-HTVSDGVAASMAPR 265
SL H S L A ++++VPRHA S+ ++ +G A PR
Sbjct: 302 SLRHAHSAEDLAATPPASDIITVPRHASSMRIKSIMEGGAPVRPPR 347
>SB_47035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 395 RLAVPIAPTATQTSSPLAARGAEIQSSIKPSSRLMLS 505
++ P P++ + SPL A+I S + PSS ++S
Sbjct: 255 KIMTPFTPSSAKIMSPLTTSSAKIMSPLTPSSAKIMS 291
>SB_18330| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 997
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 639 DGGFYLYICDELSAFTAEWLVFHHGECRIGHWIP 538
D G Y C+E +AFT W VF H R GH P
Sbjct: 750 DNGPQFY-CEEFAAFTKSW-VFEHRTGRQGHQQP 781
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 445 RCKGCGNPIVDKAIIALDAK-WHRDCFTCMKCRNPVTDST 561
+C C P+ + K WH+ C TC C N DST
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHC-NKRLDST 42
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 248 SPNITARGAMDAATPSLTV*SKLLACRGTLTTSSAVDA 361
+P++T + + A TPSLT + L+A +LTT + + A
Sbjct: 702 TPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTLIA 739
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 248 SPNITARGAMDAATPSLTV*SKLLACRGTLTTSSAVDA 361
+P++T + + A TPSLT + L+A +LTT + + A
Sbjct: 715 TPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTLIA 752
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 248 SPNITARGAMDAATPSLTV*SKLLACRGTLTTSSAVDA 361
+P++T + + A TPSLT + L+A +LTT + + A
Sbjct: 728 TPSLTTQTTLIATTPSLTTQTTLIATTPSLTTQTTLIA 765
>SB_15946| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 285
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 9/59 (15%)
Frame = +1
Query: 403 RPYCSDCYADKFATRCKGCGNPIV---DKAIIALDAKWHRDCF------TCMKCRNPVT 552
RP C C + A CK C P+ + ++ L + +D + TC C +PVT
Sbjct: 116 RPTCKTCTSPVTALTCKTCTFPVTALHARRVLHLSPPYMQDVYFTCHRPTCKTCTSPVT 174
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 9/62 (14%)
Frame = +1
Query: 403 RPYCSDCYADKFATRCKGCGNPIV---DKAIIALDAKWHRDCF------TCMKCRNPVTD 555
RP+ D Y CK C +P+ + ++ L + +D + TC C +PVT
Sbjct: 69 RPHMQDVYFTCHRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFICHRPTCKTCTSPVTA 128
Query: 556 ST 561
T
Sbjct: 129 LT 130
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +1
Query: 406 PYCSDCYADKFATRCKGCGNPIV---DKAIIALDAKWHRDCF------TCMKCRNPVT 552
PY D Y CK C +P+ + ++ L + +D + TC C +PVT
Sbjct: 187 PYMQDVYFTCHRPTCKTCTSPVTALHARRVLHLSPPYMQDVYFTCNRPTCKTCTSPVT 244
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 145 KKWHPEHFVCNTCRKPIDGAKFHQHN--NGVHCVPCFTKHHSPRCH 276
+K+ E+ +C C G H+ N NG C C +HH+ CH
Sbjct: 103 RKFFSENRLCFNC-----GRTGHRENKCNGRGCYKCKARHHTSLCH 143
>SB_53919| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 289
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 145 KKWHPEHFVCNTCRKPIDGAKFHQHN--NGVHCVPCFTKHHSPRCH 276
+K+ E+ +C C G H+ N NG C C +HH+ CH
Sbjct: 166 RKFFSENRLCFNC-----GRTGHRENKCNGRGCYKCKARHHTSLCH 206
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 145 KKWHPEHFVCNTCRKPIDGAKFHQHN--NGVHCVPCFTKHHSPRCH 276
+K+ E+ +C C G H+ N NG C C +HH+ CH
Sbjct: 328 RKFFSENRLCFNC-----GRTGHRENKCNGRGCYKCKARHHTSLCH 368
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 284 ATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAE 463
A+P TV S++ RGT S + D+ ++ + R + AP T S AA G
Sbjct: 963 ASPGTTVASEITVTRGTTVASESTDSESTIVPVTTVAREST-FAPVTTLASESTAAPGTT 1021
Query: 464 I 466
+
Sbjct: 1022 V 1022
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Frame = +2
Query: 284 ATPSLTV*SKLLACRGTLTTSSAVD-----------ARRSLAVEGSWNRLAVPIAPTATQ 430
A+P +TV S++ RGT S + D AR S G+ + +AP T
Sbjct: 790 ASPGITVASEITVTRGTTVASESTDSESTIVPVTTVARESTFAPGTSVSPEITVAPGPTI 849
Query: 431 TSSPLAARGAEIQSS 475
S RGA + S+
Sbjct: 850 GSESTVTRGATVASA 864
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 284 ATPSLTV*SKLLACRGTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAE 463
A+P TV S++ RGT S + D+ ++ + R + AP T S AA G
Sbjct: 1352 ASPGTTVASEITVTRGTTVASESTDSESTIVPVTTVAREST-FAPGTTLASESTAAPGTT 1410
Query: 464 I 466
+
Sbjct: 1411 V 1411
>SB_45743| Best HMM Match : Sushi (HMM E-Value=4.5e-10)
Length = 206
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 256 HHSPRCHGCGDPITDRVIQA 315
H PRC C +P+TD IQ+
Sbjct: 50 HDPPRCEDCVNPLTDTAIQS 69
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 145 KKWHPEHFVCNTCRKPIDGAKFHQHN--NGVHCVPCFTKHHSPRCH 276
+K+ E+ +C C G H+ N NG C C +HH+ CH
Sbjct: 103 RKFFSENRLCFNC-----GRTGHRENKCNGRGCYKCKARHHTSLCH 143
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 436 FATRCKGCGNPIV--DKAIIALDAKWHRDCFTCMKC-RNPVTDSTFSVMENQPLC 591
F T+C C D + A + +H DCF C+ C R V F++ E+ C
Sbjct: 80 FGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFC 134
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +1
Query: 79 EAPAVCNSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKH 258
E+ AVC C++V N +HP+ +T P K + +GVH CF
Sbjct: 408 ESEAVCAVCEQVNDLMFCGDCNSAYHPDCIGLSTA--PKGKFKCDECTSGVH--SCFVCR 463
Query: 259 HSPRCHGCGDPITDR 303
+ C P+ +
Sbjct: 464 QTGDVKACSQPLCSK 478
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 28.7 bits (61), Expect = 5.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 223 NGVHCVPCFTKHHSP 267
NG HC+PC H+ P
Sbjct: 704 NGTHCIPCHVGHYCP 718
>SB_5367| Best HMM Match : wnt (HMM E-Value=0)
Length = 367
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 139 LNKKWHPEHFVCNTCRKPIDG-AKFHQHNNGVHCV 240
+N W HFVCN +D AK + +HC+
Sbjct: 64 VNILWFSVHFVCNVSNARLDARAKNTTSSGNIHCI 98
>SB_23296| Best HMM Match : Glyco_hydro_2_N (HMM E-Value=4.2e-24)
Length = 201
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 492 RDDGFIDDWISAPLAASGELVCVAVGA 412
++ GF + W S PL SGE++ + V A
Sbjct: 93 KEAGFAESWFSRPLEKSGEVIPMPVPA 119
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = +1
Query: 448 CKGCGNPIV--DKAIIAL----DAKWHRDCFTCMKCRNPVTDSTFSVMENQPLC 591
CK C P+ D A+ A D+ WH CFTC + + D + + + C
Sbjct: 193 CKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDAEIYC 246
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 142 NKKWHPEHFVCNTCRKPIDGAKFHQHN 222
N K+H + F C CRK +D H+
Sbjct: 3 NHKFHKKCFSCKDCRKKLDSTNAASHD 29
>SB_17543| Best HMM Match : Keratin_B2 (HMM E-Value=1.9)
Length = 229
Score = 27.9 bits (59), Expect = 9.8
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Frame = +1
Query: 403 RPYCSDCYADKFATRCKGCGNPIV---DKAIIALDAKWHRDC-FTCMKCRNPVTDSTFSV 570
RP C C A CK C +P+ + ++ L + +D FTC R + D F
Sbjct: 46 RPTCKTCTFPVIALTCKTCTSPVTALHARRVLHLSPPYMQDVYFTCH--RPHMQDVYFPC 103
Query: 571 MENQPLCGKCA*FITNI*IKS 633
++P C C +T + K+
Sbjct: 104 --HRPTCKTCTSPVTALTCKT 122
>SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16)
Length = 391
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 403 RPYCSDCYADKFATRCKGCGNPIVD 477
R +CS C DK + CG+PIVD
Sbjct: 12 RTHCSQC--DKIQKSIRKCGDPIVD 34
>SB_5380| Best HMM Match : zf-CXXC (HMM E-Value=2.9)
Length = 231
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 575 SITENVESVTGFLHFMHVKQSRCHLASSAMMA 480
S E+V F H VK RC+LA+S++ A
Sbjct: 183 STLESVSKSFRFSHRFRVKDERCYLAASSLRA 214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,933,006
Number of Sequences: 59808
Number of extensions: 554023
Number of successful extensions: 1925
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -