Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31138
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    32   0.017
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   2.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   6.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   6.1  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    24   6.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.1  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 32.3 bits (70), Expect = 0.017
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +1

Query: 97  NSCDKVIQGRIVTALNKKWHPEHFVCNTCRKPIDGAKFHQHNNGVHCVPCFTKHHSPRCH 276
           ++CD+  +G    AL        + C  C  P +GA      + V C+ C   +  PRC 
Sbjct: 752 DTCDQCAKGYYGNALGGT----PYDCKRCPCPNNGACMQMAGDTVICLECPVGYFGPRCE 807

Query: 277 GCGD 288
            C D
Sbjct: 808 LCSD 811



 Score = 24.6 bits (51), Expect = 3.5
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +1

Query: 223 NGVHCVPCFTKHHSPRCHGC 282
           +G HC+ C      P C  C
Sbjct: 363 HGGHCIDCGANRDGPNCERC 382


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 166 FVCNTCRKPIDGAKFHQHNNGVHCVPCF 249
           ++C TC + ID  K   H +G     CF
Sbjct: 334 YICRTCPRTIDLWKHFVHADGTVRFECF 361


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +1

Query: 211 HQHNNGVHCVPCFTKHHSPRCHGCGDPITDRVIQALGVSWHAHH 342
           HQH++    +P   +HH    H    P+  +   A  +  H HH
Sbjct: 119 HQHHHQHPHLPHVQQHHPSVHHPAHHPLHYQPAAAAAMHHHHHH 162


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 18/75 (24%), Positives = 27/75 (36%)
 Frame = -2

Query: 252  GEAGHAMDPVVVLVKLSSVDRLTASVADKVFGVPFLVQRRHDSALNHFVAAVTDGGGFNL 73
            G +G     +V       +D         V G+ FL    H+S   HF+   +       
Sbjct: 887  GYSGKNSSTLVTASHAIFIDHRGHKAPAAVVGLQFL----HESLFKHFINITSKCTASTT 942

Query: 72   C*HDCAGDCFYIFLL 28
            C  +CA D    +LL
Sbjct: 943  CKKNCASDELDCYLL 957


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +3

Query: 321  RVVARSPLRLRW-----MQEGAWRWRVHGTGW 401
            R VAR  LRL W     +QEG ++W +   GW
Sbjct: 1168 RQVARD-LRLGWENVDELQEGQFQWPMLSFGW 1198


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 145 KKWHPEHFVCNTCRKP 192
           +KW P  F+  TC KP
Sbjct: 392 RKWTPAPFLDRTCTKP 407


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 329 GTLTTSSAVDARRSLAVEGSWNRLAVPIAPTATQTSSPLAARGAEIQSSIKPSSR---LM 499
           GT   +S       +  E S+++ A+P+  T  +  SP+  +G    +++  + R   L+
Sbjct: 25  GTGDRASIQRLEDEMVQERSFSQRALPVPRTQNRNGSPINHQGNAASANVAVADRQQSLI 84

Query: 500 LSG 508
           L+G
Sbjct: 85  LAG 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,686
Number of Sequences: 2352
Number of extensions: 16945
Number of successful extensions: 63
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)