Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31135
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058618-1|AAL13847.1|  515|Drosophila melanogaster LD31216p pro...    29   7.6  
AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-P...    29   7.6  
AE014297-179|AAF52072.1|  515|Drosophila melanogaster CG12007-PA...    29   7.6  

>AY058618-1|AAL13847.1|  515|Drosophila melanogaster LD31216p
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 621 RNNFSIRYWSWNYRGLLAPELASN 550
           R NFS  Y SW++R LL PEL  N
Sbjct: 204 RANFS-NYSSWHHRSLLLPELYPN 226


>AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-PA
           protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 435 RAN-YPLPARGGSDEK*RYGTLTRPRNRNEYTLNI-LTRNNWRQVLV 569
           RAN YPL   GG+D    +GT+ RP    E ++   +  N+W   L+
Sbjct: 352 RANGYPL---GGTDHNHGHGTIIRPNQTTEISIQFGVQPNSWHYALL 395


>AE014297-179|AAF52072.1|  515|Drosophila melanogaster CG12007-PA
           protein.
          Length = 515

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 621 RNNFSIRYWSWNYRGLLAPELASN 550
           R NFS  Y SW++R LL PEL  N
Sbjct: 204 RANFS-NYSSWHHRSLLLPELYPN 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,309,640
Number of Sequences: 53049
Number of extensions: 695220
Number of successful extensions: 1823
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)