Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31135
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.5
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 24 1.5
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 2.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 6.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 8.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 8.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 8.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 8.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 8.1
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 229 PKSLILMNLDNFCRSHGQVPAT 294
P+ L +NL + CR HG PAT
Sbjct: 430 PRELEAVNLGSACRIHGS-PAT 450
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -2
Query: 662 PTARRTNATTSFLTATILVYAIGAGITAGCWHQNL 558
PT +TN T + + G G WH NL
Sbjct: 377 PTFNQTNVDQYLYNQTGPLSSTGLAQVTGIWHSNL 411
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 668 GAPTARRTNATTSFLTAT-ILVYAIGAGITAGCWHQNLP 555
GA T A+ ++ T L + + + GCW++N P
Sbjct: 294 GASDILWTQASAKAISETGALFFGLVSDTALGCWNENRP 332
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 3.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 38 MSQCKPY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLT 172
M C P DT +Y+F R Y + T VI + + TLT
Sbjct: 230 MYACCP--NDTYPMIVYEFSISRHYGILHATYVIPAVTMMLLTLT 272
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 10 YACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 123
Y C + + LRR + ++++VP + +SYL
Sbjct: 215 YPCCDEPYPDIFFNITLRRKTLFYTVNLIVPCVSISYL 252
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 417 SKEGSRRANYPLPARGGSDEK*RYG 491
+K S+ AN P PA GG + + G
Sbjct: 1014 AKPQSQEANKPKPATGGKGTRPKRG 1038
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/38 (18%), Positives = 21/38 (55%)
Frame = +1
Query: 10 YACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 123
Y C + + ++ +RR + +++++P + +S+L
Sbjct: 224 YTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 261
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/38 (18%), Positives = 21/38 (55%)
Frame = +1
Query: 10 YACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLSYL 123
Y C + + ++ +RR + +++++P + +S+L
Sbjct: 224 YTCCDEPYLDITFNITMRRKTLFYTVNIIIPCMGISFL 261
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 657 SAAHKCNYELFNRNNFSIRYWSWNY 583
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 657 SAAHKCNYELFNRNNFSIRYWSWNY 583
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 657 SAAHKCNYELFNRNNFSIRYWSWNY 583
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 657 SAAHKCNYELFNRNNFSIRYWSWNY 583
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 657 SAAHKCNYELFNRNNFSIRYWSWNY 583
S ++ NY +N NN+ ++ NY
Sbjct: 84 SLSNNYNYSNYNNNNYKQLCYNINY 108
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,524
Number of Sequences: 438
Number of extensions: 4524
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -