Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31133
         (782 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34)         29   5.6  
SB_42630| Best HMM Match : Ets (HMM E-Value=0)                         28   7.4  
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  

>SB_43214| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 424

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -2

Query: 223 PAAHRVYFSFLVHASLHACYGLRLLINEFTKLMAES 116
           P AHR Y  +LV   + AC  L LLI  F K   ES
Sbjct: 357 PNAHRPYKVWLVIPVIAACAALYLLITPFAKEPVES 392


>SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 351

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 424 LAHKFPQHQLISACLKIYSSSCDIITQLEQTL 329
           L HKF Q +++   LKI SS  + + Q++Q L
Sbjct: 277 LFHKFKQSKVVLGVLKIASSQIETVQQVKQRL 308


>SB_23468| Best HMM Match : Peptidase_C14 (HMM E-Value=8.7e-34)
          Length = 212

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 242 NAVCRAARGSPRLFFILGTR 183
           NA+CR+  G P+LFFI   R
Sbjct: 68  NALCRSLAGKPKLFFIQACR 87


>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
          Length = 631

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 679 PSYSRAAASRMHLLPDRKRVP 617
           PS SRA+ASR HL P R  +P
Sbjct: 55  PSTSRASASRSHLFPLRTGLP 75


>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 977

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -2

Query: 679 PSYSRAAASRMHLLPDRKRVP 617
           PS SRA+ASR HL P R  +P
Sbjct: 401 PSTSRASASRSHLFPLRTGLP 421


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,970,285
Number of Sequences: 59808
Number of extensions: 398967
Number of successful extensions: 631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)