Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31132
         (829 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL...    31   0.93 
At5g06970.1 68418.m00789 expressed protein                             29   2.8  
At1g22900.1 68414.m02860 disease resistance-responsive family pr...    28   6.6  

>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
           (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
           (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
           {Arabidopsis thaliana}; contains Pfam profiles: PF00614
           phospholipase D.active site motif, PF00168 C2 domain
          Length = 1083

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 340 SEEMLYCFFLEATLSYLLVYANFQEYIYHLKRLVSYQSHHKYL 468
           S +M    F + +L  LL++ N   +IYH K L +    HK L
Sbjct: 253 SADMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHKTL 295


>At5g06970.1 68418.m00789 expressed protein
          Length = 1101

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 427 SDKYILENLHKLTNKKELLPKKNNTAFLQILSQRAPKI*LFNTKHI 290
           SD+    +L  L  + + L KK++T F+ ILSQR P+   F+   I
Sbjct: 595 SDRNNEHHLALLAEETKKLMKKDSTIFMPILSQRHPQAIAFSASLI 640


>At1g22900.1 68414.m02860 disease resistance-responsive family
           protein similar to pathogenesis-related protein [Pisum
           sativum] gi|4585273|gb|AAD25355
          Length = 187

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 192 IFNSLLLVIFSLFQEKPD*KTISCKNKEVHKLLYIHNY 79
           IF+++LL+  ++ Q KP  KT   +  +  KL ++H Y
Sbjct: 13  IFSTVLLLTITVTQSKPYSKTTPFQGNKPDKLTHLHFY 50


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,323,018
Number of Sequences: 28952
Number of extensions: 280389
Number of successful extensions: 552
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)