Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31130
(440 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 163 1e-39
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 135 5e-31
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 133 2e-30
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 132 3e-30
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 118 7e-26
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 112 4e-24
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 107 1e-22
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 106 2e-22
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 105 3e-22
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 104 1e-21
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 95 4e-19
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 91 1e-17
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 80 2e-14
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 73 4e-12
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 71 8e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 69 4e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 69 4e-11
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 52 5e-06
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 42 0.006
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 38 0.072
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 37 0.22
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 35 0.67
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 1.6
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 2.1
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 33 2.1
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 2.7
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 32 4.7
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 32 4.7
UniRef50_A3DM99 Cluster: Na+/H+ antiporter MnhB subunit-related ... 32 6.3
UniRef50_Q7NJN0 Cluster: Glr1802 protein; n=1; Gloeobacter viola... 31 8.3
UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1... 31 8.3
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 163 bits (397), Expect = 1e-39
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 135 bits (326), Expect = 5e-31
Identities = 66/141 (46%), Positives = 93/141 (65%)
Frame = +3
Query: 18 KHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLA 197
+H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVSR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 198 RHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDXLA 377
R +K+ VV GTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T D LA
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLA 128
Query: 378 LRAPTGKKTVLVQGQRNAREA 440
+RAP G+ T++++G RN+REA
Sbjct: 129 VRAPKGQNTLILRGPRNSREA 149
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 133 bits (321), Expect = 2e-30
Identities = 69/139 (49%), Positives = 93/139 (66%)
Frame = +3
Query: 24 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 203
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 204 MKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDXLALR 383
M+ +EG I VV G VT+D+R+Y +P + V AL TE ARARI AGGE LTFD LALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 384 APTGKKTVLVQGQRNAREA 440
P TVL++G +NAREA
Sbjct: 126 LPL-TDTVLLRGPKNAREA 143
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 132 bits (319), Expect = 3e-30
Identities = 62/103 (60%), Positives = 82/103 (79%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVV G +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQG 419
+ AL VT +ARARI+ AGGEI+TFD LAL++P G+ TVL+QG
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQG 111
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 118 bits (283), Expect = 7e-26
Identities = 59/110 (53%), Positives = 80/110 (72%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVV GTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNAREA 440
+V AL VTE AR RILA+GGE+LTFD L R+PTG + L++G AREA
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREA 147
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 112 bits (269), Expect = 4e-24
Identities = 65/146 (44%), Positives = 84/146 (57%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
ID++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 3 IDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
S+LA MKK E AV TVT D R Y +PKM V AL T+ A A I AGG+ L
Sbjct: 63 TSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLR 119
Query: 363 FDXLALRAPTGKKTVLVQGQRNAREA 440
FD LAL+APTG+KTVL++G+RN REA
Sbjct: 120 FDELALKAPTGRKTVLIRGKRNVREA 145
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 107 bits (256), Expect = 1e-22
Identities = 54/110 (49%), Positives = 73/110 (66%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVV G++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNAREA 440
V AL TE AR RI+ AGGE LTFD LALR PTGK +L++G AR A
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTA 203
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 106 bits (254), Expect = 2e-22
Identities = 61/136 (44%), Positives = 78/136 (57%)
Frame = +3
Query: 27 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 206
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 207 KKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDXLALRA 386
K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 387 PTGKKTVLVQGQRNAR 434
PTG VL+QG+R+ R
Sbjct: 130 PTGDNCVLLQGRRSCR 145
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 105 bits (253), Expect = 3e-22
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 6/116 (5%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVXGTVTNDVRL 272
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVV G V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 273 YKIPKMTVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNAREA 440
+IP M V AL ++ AR I+AAGGE LTFD LA+ APTGK T L++G+++ RE+
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRES 155
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 104 bits (249), Expect = 1e-21
Identities = 57/110 (51%), Positives = 73/110 (66%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T+++FN VLRRL +R R PISVSRL + + + VV GTVT+D RL +PK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNAREA 440
V AL TE AR RILAAGG+ LTFD LA + PTG T+L++G + REA
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREA 363
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 95.5 bits (227), Expect = 4e-19
Identities = 55/109 (50%), Positives = 69/109 (63%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T++ FN VLRRL +R R PISVSRL + + + VV GTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNARE 437
V TE AR RILAAGG+ LTFD LA + PTG T+L++G R E
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPRVREE 439
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 91.1 bits (216), Expect = 1e-17
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = +3
Query: 165 NRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 344
N+PP+S+SR+ MK P +E AVV GT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 345 GGEILTFDXLALRAPTGKKTVLVQGQRNARE 437
GG+ LTFD LAL +P TVL+ G R RE
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGRE 183
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 79.8 bits (188), Expect = 2e-14
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +3
Query: 171 PPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 350
PP+ +SR+ R MK E A V GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 351 EILTFDXLALRAPTGKKTVLVQGQRN 428
+IL+FD LA+ +P G + QG R+
Sbjct: 107 KILSFDQLAMTSPKGPQK-CYQGYRH 131
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 72.5 bits (170), Expect = 4e-12
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3
Query: 258 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNARE 437
+D R+ +PK++V AL VTE AR RILA+GGE+LTFD L R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 438 A 440
A
Sbjct: 185 A 185
Score = 54.8 bits (126), Expect = 8e-07
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 291 TVAALHVT 314
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 71.3 bits (167), Expect = 8e-12
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP++
Sbjct: 112 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLA 171
Query: 183 VSRL 194
+SR+
Sbjct: 172 LSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 68.9 bits (161), Expect = 4e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 27 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 206
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 207 KKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARI 335
++G I VV G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 68.9 bits (161), Expect = 4e-11
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 27 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 206
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 207 KKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARI 335
++G I VV G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 52.0 bits (119), Expect = 5e-06
Identities = 28/102 (27%), Positives = 56/102 (54%)
Frame = +3
Query: 120 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVA 299
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 300 ALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQR 425
AL+ + + +I+ GG+I + + + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +3
Query: 204 MKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDXLALR 383
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 384 APTGKKTVLV 413
P G +V
Sbjct: 112 YPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 38.3 bits (85), Expect = 0.072
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +3
Query: 168 RPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 347
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 348 GEILTFDXLALRAPTGKKTVLV 413
G + F L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 36.7 bits (81), Expect = 0.22
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 126 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAA 302
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 303 LHVTEKARARILAAGGEILTFDXLALRAPTG 395
+E A+ + AGG +T L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 36.3 bits (80), Expect = 0.29
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = -2
Query: 352 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPXTTAIKPSRVGFFMWRAKRDTEIG 173
SPP K+ + A +V +AA V FG + S VTVP TT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 172 GRLI 161
G LI
Sbjct: 63 GSLI 66
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 35.1 bits (77), Expect = 0.67
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = -1
Query: 353 FSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPXYHGNQTLTSWLLHVARQTRHRDW 174
F++S Q+ +SS+ L S VI + +++LL +R + +R+W
Sbjct: 88 FTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNRNW 147
Query: 173 WPVDTAHKEPA*NDLIEFGICTS 105
W VD ++ ++L+E+ I T+
Sbjct: 148 WSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 1.6
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGK 398
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 2.1
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +3
Query: 114 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMT 293
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 294 VAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQ 416
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 33.5 bits (73), Expect = 2.1
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 114 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVXGTVTNDVRLYKIPKM 290
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQ 416
VAA + AR +I AAGGE LT L P G +++
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 2.7
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 192 LARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAAL 305
+ + MK P E AVV G VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 120 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVXGTVTNDVRLY 275
+F +++ L++S RP I SV LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA--GLGIV 1301
Query: 276 KIPKMTVAALH 308
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 4.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 197 RQTRHRDWWPVDTAHKEP 144
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 32.3 bits (70), Expect = 4.7
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = +3
Query: 135 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVT 314
+ +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 315 EKARARILAAGGEILTFDXLALRAPTG 395
E A +I AGG+ L+ + + P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
>UniRef50_A3DM99 Cluster: Na+/H+ antiporter MnhB subunit-related
protein; n=1; Staphylothermus marinus F1|Rep: Na+/H+
antiporter MnhB subunit-related protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 278
Score = 31.9 bits (69), Expect = 6.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 287 LRYLVQSHVICDCPXYHGNQTLTSWLLHVARQTRHRDWW 171
L Y++ S ++ P N+ L +W L ++DWW
Sbjct: 24 LSYMLVSFLVISVPPQETNRWLANWFLTTTYNWENKDWW 62
>UniRef50_Q7NJN0 Cluster: Glr1802 protein; n=1; Gloeobacter
violaceus|Rep: Glr1802 protein - Gloeobacter violaceus
Length = 344
Score = 31.5 bits (68), Expect = 8.3
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2
Query: 223 SRVGFFMWRAKRDTEIGGRLIRLIKSRRRTI*LNLA 116
S G+ WRA R TE GRL IKS R + L+LA
Sbjct: 197 SEPGWVQWRADRLTEFLGRLYTQIKSVRPELLLSLA 232
>UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 2328
Score = 31.5 bits (68), Expect = 8.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 119 QIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGXGDSHK*RETVQDTEDDGG 298
Q+Q D S + + Y P+TN C+S AP++ + C+ S T +D +
Sbjct: 702 QLQPDNSCACVNQVYDPSTNKCISC-APNQVYDPINKICQNCNPS---CSTCKDASNLNT 757
Query: 299 CSSC 310
C+SC
Sbjct: 758 CTSC 761
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,292,284
Number of Sequences: 1657284
Number of extensions: 8088047
Number of successful extensions: 18606
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 18143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18591
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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