Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31130
         (440 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   0.56 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.2  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    20   9.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    20   9.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = -2

Query: 298 ATVIFGILYSLTSFVTVPXTTAIKPSRVGFF---MWRAKRDTEIGGRLIRLIKSRRR 137
           +T I  I + +   VTV  T A+K S++  F   M R     +  G  I  ++ +RR
Sbjct: 76  STAILEIAFEVIFIVTVWMTGAVKHSKIAHFLNKMIRLDERFQSVGLQIDTVREKRR 132


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 230 QTLTSWLLHVARQTRHRDWW 171
           QTL  WL H        DW+
Sbjct: 658 QTLAMWLNHNPNYAEVTDWY 677


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 317  FGNMKSSHRHLRYLVQS 267
            FG + S H HL  L++S
Sbjct: 1301 FGKLCSLHHHLSKLIKS 1317


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = -2

Query: 202 WRA-----KRDTEIGGRLIRLIKSRRR 137
           WRA     KR TEI   LI  IKSR +
Sbjct: 537 WRAFLAVLKRRTEIYKGLIDRIKSREK 563


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 228 LIAVVXGTVTNDVRLYKIPKMTVAALHV 311
           LI+   G      + Y IPK T+  +H+
Sbjct: 64  LISRALGEDVRTQKGYLIPKDTITIIHI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,935
Number of Sequences: 336
Number of extensions: 1993
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)