Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31130
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 163 2e-40
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 163 2e-40
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 163 2e-40
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 163 2e-40
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 161 7e-40
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 139 5e-33
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 163 bits (397), Expect = 2e-40
Identities = 82/145 (56%), Positives = 100/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLS 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 161 bits (392), Expect = 7e-40
Identities = 81/145 (55%), Positives = 99/145 (68%)
Frame = +3
Query: 3 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 182
+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 3 VDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLC 62
Query: 183 VSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILT 362
+SR+ R MK P RE AVV GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILT
Sbjct: 63 LSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILT 122
Query: 363 FDXLALRAPTGKKTVLVQGQRNARE 437
FD LAL +P G TVL+ G R RE
Sbjct: 123 FDQLALDSPKGCGTVLLSGPRKGRE 147
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 139 bits (336), Expect = 5e-33
Identities = 67/109 (61%), Positives = 84/109 (77%)
Frame = +3
Query: 111 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVXGTVTNDVRLYKIPKM 290
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVV GT+T+DVR+ ++PK+
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 291 TVAALHVTEKARARILAAGGEILTFDXLALRAPTGKKTVLVQGQRNARE 437
V AL VT +AR+RIL AGG+ILTFD LAL +P G TVL+ G R RE
Sbjct: 76 KVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGRE 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,883,793
Number of Sequences: 237096
Number of extensions: 1303294
Number of successful extensions: 2473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2473
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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