Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31125
         (472 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404...    27   5.8  
10_07_0078 + 12657239-12658324                                         27   7.6  

>11_03_0140 -
           10637818-10638059,10638189-10638461,10639963-10640473,
           10640556-10640768,10642717-10642784,10642893-10642958,
           10644862-10644961
          Length = 490

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 181 SMQPENMQSMQSTPGGRCTQQRPERYMQQLQGT 83
           S+  +   ++ S+PG R  Q+RP+    Q++G+
Sbjct: 153 SISEKESSNLDSSPGNRTVQERPDSDSAQVKGS 185


>10_07_0078 + 12657239-12658324
          Length = 361

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 127 TQQRPERYMQQLQGTCSSPAEAWLTRKP 44
           ++QR ERY     G+CS+ +  W  + P
Sbjct: 90  SEQRRERYASPYPGSCSNSSLLWCLQDP 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,836,342
Number of Sequences: 37544
Number of extensions: 115662
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)