Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31125
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical pr...    31   0.32 
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    31   0.32 
U21308-1|AAB93314.3|  300|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical p...    27   6.8  
AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical ...    27   6.8  

>Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical
           protein T23D8.9b protein.
          Length = 239

 Score = 31.5 bits (68), Expect = 0.32
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 181 SMQPENMQSMQSTPGGRCTQQRPERYMQQLQGTCSSPAEAWLTRKPGEQRR 29
           SMQP   Q  Q TP    TQQ+ +   QQ +   SSP+ +     P + ++
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAAPAQNQK 107


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 31.5 bits (68), Expect = 0.32
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 181 SMQPENMQSMQSTPGGRCTQQRPERYMQQLQGTCSSPAEAWLTRKPGEQRR 29
           SMQP   Q  Q TP    TQQ+ +   QQ +   SSP+ +     P + ++
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAAPAQNQK 107


>U21308-1|AAB93314.3|  300|Caenorhabditis elegans Hypothetical
           protein ZK1290.7 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 356 SSGFQAPG--RKIKSVANHTFLYCNQINKIYHINIFG 252
           SS F+A    +K+  +++H FL C    ++  INIFG
Sbjct: 102 SSNFEAESQLKKVLELSSHHFLICQLFQRLPIINIFG 138


>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
          protein Y57G11B.5 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 13 MFKYLIFVALLAFASAKPL 69
          MFK L+F ALLA+A A P+
Sbjct: 1  MFKSLVFSALLAYAVAAPM 19


>Z81047-14|CAH04642.1|  357|Caenorhabditis elegans Hypothetical
           protein C41G6.16 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 251 NQIC*CDIFYLFDYNTKKYDSRLILFFCLALEILNL 358
           NQIC   I   F + T  Y   +ILFF L  +I N+
Sbjct: 167 NQICNTIISTSFIFVTLNYTMMIILFFQLPSQICNM 202


>AL032663-8|CAD89752.1|  321|Caenorhabditis elegans Hypothetical
           protein Y75B12B.10 protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 251 NQIC*CDIFYLFDYNTKKYDSRLILFFCLALEILNL 358
           NQIC   I   F + T  Y   +ILFF L  +I N+
Sbjct: 142 NQICNTIISTSFIFVTLNYTMMIILFFQLPSQICNM 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,612,721
Number of Sequences: 27780
Number of extensions: 110158
Number of successful extensions: 321
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)