Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31122
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    31   0.011
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   1.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 30.7 bits (66), Expect = 0.011
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 184 KEFVRPVHDAHVHDEFERFKVKHQRQY-ASDLEHEKRLNIFRQSL 315
           K F +   +A V  E  R  ++  R Y ASDLE E RL  FR+ L
Sbjct: 157 KVFAKAREEATVVPEGSRTPIEIPRDYTASDLEEEHRLAYFREDL 201


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 368 FTDMVKPRFARLFECMYLSDCLK 300
           F+D  KP +  L E  Y+  C+K
Sbjct: 30  FSDDTKPDYKSLQELKYMERCIK 52


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 118 SNMQCTGFPGPGSRHFATFNPMKEFVRPVHDAHV 219
           S+MQ    P P + H A  +P        HD  V
Sbjct: 112 SHMQFMQLPHPAAAHSALLSPAMPHNLTRHDGSV 145


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 76  NLHNPDSNDRSGSP 35
           N  +P S+DRSG+P
Sbjct: 933 NSASPASSDRSGTP 946


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,255
Number of Sequences: 336
Number of extensions: 2343
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)