Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31122
(631 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 3e-42
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 6e-21
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 90 1e-18
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 6e-16
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 70 2e-12
SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 65 4e-11
SB_1137| Best HMM Match : CC (HMM E-Value=2) 58 4e-09
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 54 1e-07
SB_4269| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_54627| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_49960| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_28340| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09) 40 0.002
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 37 0.012
SB_37788| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 30 1.3
SB_26788| Best HMM Match : zf-UBR1 (HMM E-Value=6.7) 30 1.8
SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_59160| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_54595| Best HMM Match : Sec7 (HMM E-Value=7.7e-09) 29 3.1
SB_42932| Best HMM Match : zf-UBR1 (HMM E-Value=7.1) 29 3.1
SB_59279| Best HMM Match : SURF6 (HMM E-Value=3.5) 29 4.1
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 4.1
SB_5270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_31271| Best HMM Match : Extensin_2 (HMM E-Value=5.7) 28 7.2
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 28 7.2
SB_15979| Best HMM Match : Pkinase (HMM E-Value=0) 28 7.2
SB_14739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_10159| Best HMM Match : Apo-VLDL-II (HMM E-Value=2) 27 9.5
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 168 bits (409), Expect = 3e-42
Identities = 82/198 (41%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +1
Query: 1 VRYEMKGFNSLLGSXXXXXXXXXXXXNIDEIDPDVFKVDSNMQCTGFPGPGSRHFATF-- 174
+ YEM GF+ L+GS + +VF+ + CTGFPGPG +
Sbjct: 478 IHYEMLGFDDLIGSHYDQYELDYSNYSPQAPPEEVFQTPEGLVCTGFPGPGDDDEKSIIN 537
Query: 175 NPMKEFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGF 354
NPM+EFV + VH F+++ KH++ Y + EH R F+ +LR+IHS NR + G+
Sbjct: 538 NPMQEFVEMHNVEKVHRVFDKYVKKHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRHAGY 597
Query: 355 TMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAVT 534
+++NHL DR+D EL LRGRRY+ GLP+ + + + +P E +W + GAVT
Sbjct: 598 YLAMNHLGDRSDKELRVLRGRRYTKGYNGGLPYKPDMASIND----VPDEMNWVIRGAVT 653
Query: 535 PVKDQSVCGSCWSFGTVG 588
PVKDQ+VCGSCWSFGT G
Sbjct: 654 PVKDQAVCGSCWSFGTTG 671
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 82.2 bits (194), Expect(2) = 6e-21
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Frame = +1
Query: 1 VRYEMKGFNSLLGSXXXXXXXXXXXXNIDEIDPDVFKVDSNMQCTGFPGPGSRHFATFNP 180
VRYEMKG+++LL S + D D F++ +C RHF + NP
Sbjct: 185 VRYEMKGYDNLLASYYDNYVLEYISFEEWKPDLDRFELPKGSECYNLSHSFDRHFVS-NP 243
Query: 181 MKEFVRPVH-DAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFT 357
M+EF+ D + + +++ +H +QY S+ E KR +IFR ++RYI S NR N +
Sbjct: 244 MQEFMSYGKVDFAIERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKNLKYK 303
Query: 358 MSVNHLADRTDDELAALRG 414
++ NH D TD E +G
Sbjct: 304 LAPNHFVDLTDGEYDQHKG 322
Score = 36.3 bits (80), Expect(2) = 6e-21
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 523 GAVTPVKDQSVCGSCWSFGTVGA 591
GAV+PV+ Q +CGSC++ VGA
Sbjct: 322 GAVSPVRGQGICGSCYALAAVGA 344
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 90.2 bits (214), Expect = 1e-18
Identities = 50/142 (35%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
+ NPM EF V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR +
Sbjct: 23 SINPMAEFTSLGQSRDPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 82
Query: 346 RGFTMSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFG 525
+ + +NH D TDDE + +G S + + E D G
Sbjct: 83 LPYKLELNHFPDLTDDEFKSYKG-ALDDESKDVMNDHDDVIDDDVNDETQEDEEDEPSDG 141
Query: 526 AVTPVKDQSVCGSCWSFGTVGA 591
AV P K Q CGSCW+F T GA
Sbjct: 142 AVNPAKGQGTCGSCWAFATAGA 163
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 81.4 bits (192), Expect = 6e-16
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Frame = +1
Query: 226 EFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDELAA 405
+++ +K+ H ++Y + E R I+R +L+ I +N FT+++NHL D T DE
Sbjct: 246 QWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGHSFTLAMNHLGDLTQDEFRY 305
Query: 406 LRGRRYSGPSPHGLPFPYSKSR--VEELSVKLPPEHDWRLFGAVTPVKDQSVCGSCWSFG 579
Y+G H + + + V++P DWR G VTPVK+Q CGSCW+F
Sbjct: 306 F----YTGMRSHYSNYTKKQGSAFLAPSHVQVPDTVDWRKEGYVTPVKNQGQCGSCWAFS 361
Query: 580 TVGA 591
T G+
Sbjct: 362 TTGS 365
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 77.0 bits (181), Expect = 1e-14
Identities = 44/121 (36%), Positives = 65/121 (53%)
Frame = +1
Query: 229 FERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDELAAL 408
F FK ++++Y S EHEKR +I+R ++ ++ NH+AD TD E+ +
Sbjct: 426 FNTFKASYRKRYPSAHEHEKRKDIYRHNM-------------SLKPNHMADMTDAEVNRM 472
Query: 409 RGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAVTPVKDQSVCGSCWSFGTVG 588
+G + P G P+S ++ V LPP DWR GAV VK Q +CGSC++F G
Sbjct: 473 KGLLHEEPPLIG-DSPFSIPD-KDRGVPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAG 530
Query: 589 A 591
A
Sbjct: 531 A 531
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
+ NPM EF H V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR +
Sbjct: 1173 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 1232
Query: 346 RGFTMSVNHLADRTDDELAALR 411
+ + NH AD TDDE + +
Sbjct: 1233 LPYKLEPNHFADLTDDEFKSYK 1254
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 319 YIHSNNRANRGFTMSVNHLADRTDDELAALRG 414
YI S NR + + + NH AD TDDE + +G
Sbjct: 1289 YIRSMNRRSLPYKLEPNHFADLTDDEFKSYKG 1320
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
+ NPM EF H + V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR +
Sbjct: 23 SINPMAEFTSLGHSSDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS 82
Query: 346 RGFTMSVNHLADRTDDELAALRG 414
+ + NH AD TDDE + +G
Sbjct: 83 LPYKLEPNHFADLTDDEFKSYKG 105
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 74.9 bits (176), Expect = 5e-14
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Frame = +1
Query: 229 FERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDELA-- 402
++ +K H ++Y + E R I++ +L+ I ++N F +++NHL D T E++
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNEGKHSFKLAMNHLGDMTSLEISQT 88
Query: 403 --ALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAVTPVKDQSVCGSCWSF 576
L+ ++++ P G F + +VK+ DWR G VTPVK+Q CGSCW+F
Sbjct: 89 LLGLKLKKHAESQPKGATF------LPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAF 142
Query: 577 GTVGA 591
T GA
Sbjct: 143 STTGA 147
>SB_35600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 72.1 bits (169), Expect = 3e-13
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Frame = +1
Query: 1 VRYEMKGFNSLLGSXXXXXXXXXXXXNIDEIDPDVFKVDS---NMQCTGFP--GPGSRHF 165
+R EM G++++L S N D +F + + C GS
Sbjct: 60 MRLEMDGYDTVLVSYYDSYVIDYHTFNNWTYDKGIFDIPHLRHDRWCWDISKFSHGSEGA 119
Query: 166 A-TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNR 339
A + NPM EF V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR
Sbjct: 120 AMSINPMAEFTSLGQSRELVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR 179
Query: 340 ANRGFTMSVNHLADRTDDELAALRG 414
+ + + NH AD TDDE + +G
Sbjct: 180 RSLPYKLEPNHFADLTDDEFKSYKG 204
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
+ NPM EF V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR +
Sbjct: 194 SINPMAEFTSLGQSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRCS 253
Query: 346 RGFTMSVNHLADRTDDELAALRG 414
+ + NH AD TDDE + +G
Sbjct: 254 LPYKLEPNHFADLTDDEFKSYKG 276
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 214 HVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDD 393
H+ D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR + + + NH AD TDD
Sbjct: 481 HLDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRSLPYKLEPNHFADLTDD 540
Query: 394 ELAALRG 414
E + +G
Sbjct: 541 EFKSYKG 547
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
T NPM EF + V D+F+ F+ +H + Y D EH +R +IFR ++RYI S R +
Sbjct: 23 TINPMAEFTSLGYSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRRS 82
Query: 346 RGFTMSVNHLADRTDDELAALRG 414
+ + NH D TDDE + +G
Sbjct: 83 LPYKLEPNHFGDLTDDEFKSYKG 105
>SB_49063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRAN 345
+ NPM EF V D+F+ F+ +H + D EH +R +IFR ++RYI S NR +
Sbjct: 43 SINPMAEFTSLGQSRDLVDDDFDEFRQQHDKVCEDDSEHRRRKHIFRHNVRYIRSMNRRS 102
Query: 346 RGFTMSVNHLADRTDDELAALRG 414
+ + NH AD TDDE + +G
Sbjct: 103 LPYKLEPNHFADLTDDEFKSYKG 125
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +1
Query: 217 VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDE 396
V D+F+ F+ +H + Y D EH +R +IFR ++RYI S NR + + NH AD TDDE
Sbjct: 1282 VDDDFDEFRQQHDKMYEDDSEHCRRKHIFRHNVRYIRSMNRRSLPHKLEPNHFADLTDDE 1341
Query: 397 LAALRG 414
+ +G
Sbjct: 1342 FKSYKG 1347
>SB_1137| Best HMM Match : CC (HMM E-Value=2)
Length = 410
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 205 HDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADR 384
+D + + +K KH + Y + EH++R +I++ + R+I S NR N + + NHLAD
Sbjct: 306 YDRELARLYHEYKAKHGKHYRTHAEHDQRKHIYKHNFRFISSKNRQNLSYKLKTNHLADL 365
Query: 385 TDDELAALRGRRYSGPS-PHGLPFPYSKSRVEELSVKLPPEHDWR 516
T+ E+ G H + ++ K+P + DWR
Sbjct: 366 TEKEVQRTNGLLDDATKCTHAQSLHFDLAKALH---KIPVKLDWR 407
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 358 MSVNHLADRTDDELAALRGRRYSGPSPHGLPFPYS-KSRVEELSVKLPPEHDWRLFGAVT 534
M++NHL D T+DE Y G H + + +VK+P DW G VT
Sbjct: 1 MAMNHLGDLTEDEFRYF----YLGVRAHHNSTKRGWATYMPPSNVKIPSSVDWSQKGYVT 56
Query: 535 PVKDQSVCGSCWSFGTVGA 591
VK+Q CGSCW+F T G+
Sbjct: 57 GVKNQGQCGSCWAFSTTGS 75
>SB_4269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 220 HDEFE-RFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDE 396
HD + F+ +H + Y D +H + +IFR ++RYI S NR + + + NH D TDDE
Sbjct: 37 HDPVDDEFREQHDKVYEDDSKHHRLKHIFRHNVRYIRSMNRRSLPYKLEPNHFGDLTDDE 96
Query: 397 LAALR 411
+ +
Sbjct: 97 FKSYK 101
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +1
Query: 226 EFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTDDELAA 405
++ +K H + Y + E + R I+ +L + +N N + + +NH AD T E
Sbjct: 180 QWHAWKDFHGKTYTGE-EEDLRRAIWNDNLEIVKKHNAENHSYKLDMNHFADLTVTEFKQ 238
Query: 406 -LRGRRYSGPSPHGLPF-PYSKSRVEELSVKLPPEHDWRLFGAVTPVKDQ 549
G R + S G F P S +V+LP E DWR G VT VK+Q
Sbjct: 239 RFMGYRAASNSTGGSTFLPLS-------NVQLPAEVDWRDKGFVTAVKNQ 281
>SB_27810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLR 318
+ NPM EF H V D+F+ F+ +H + Y D EH +R +IFR ++R
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVR 73
>SB_54627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSL 315
+ NPM EF H V D+F+ F+ +H + Y D EH +R +IFR ++
Sbjct: 26 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 75
>SB_49960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSL 315
+ NPM EF H V D+F+ F+ +H + Y D EH +R +IFR ++
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 72
>SB_28340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSL 315
+ NPM EF H V D+F+ F+ +H + Y D EH +R +IFR ++
Sbjct: 23 SINPMAEFTSLGHSRDLVDDDFDEFQQQHDKVYEDDSEHRRRKHIFRHNV 72
>SB_52389| Best HMM Match : NACHT (HMM E-Value=2.1e-09)
Length = 818
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 169 TFNPMKEFVRPVHDAH-VHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLR 318
+ NPM EF V D+F+ F+ +H + Y D EH +R +IFR + +
Sbjct: 660 SINPMPEFTSLGQSRDLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNTK 710
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +1
Query: 442 GLPFPYSKSRVEELSVKLPPEH-----DWRLFGAVTPVKDQSVCGSCWSFGTVGA 591
G P P K + +S+ P+H W + V+DQ CGSCW+FG V A
Sbjct: 69 GPPLPLRKKLL--ISMDDVPDHFDSREQWPHCPTIKEVRDQGACGSCWAFGAVEA 121
>SB_37788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 35.1 bits (77), Expect = 0.047
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 223 DEFERFKVKHQRQYASDLEHEKRLNIFRQSL 315
D+F+ F+ +H + Y D EH +R +IFR ++
Sbjct: 3 DDFDEFRQQHDKVYEDDSEHRRRKHIFRHNV 33
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 229 FERFKVKHQRQYASDLEHEKRLNIFRQSLR 318
F FK ++++Y S EHEKR +I+R ++R
Sbjct: 298 FNAFKASYRKRYPSAHEHEKRKDIYRHNMR 327
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 319 YIHSNNRANRGFTMSVNHLADRTDDELAALRG 414
YI S NR + + NH AD TDDE + +G
Sbjct: 2 YIRSMNRRSLPHKLEPNHFADLTDDEFKSYKG 33
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 364 VNHLADRTDDELAALRGR-RYSGPSPH-GLPFPYSKSRVEELSVKLPPEHDWRLFGAVTP 537
+N AD ++E + R R++ SP G F + +++LP + DWR G VTP
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQRGATF------MAPNNLELPTKVDWRQQGYVTP 54
Query: 538 VKDQ 549
VK+Q
Sbjct: 55 VKNQ 58
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 490 KLPPEHDWRLFGAV---TPVKDQSV---CGSCWSFGTVGA 591
KLP DWR + ++Q + CGSCW+ GT A
Sbjct: 50 KLPTSFDWRDVNGTNYASTTRNQHIPQYCGSCWAHGTTSA 89
>SB_26788| Best HMM Match : zf-UBR1 (HMM E-Value=6.7)
Length = 335
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 157 RHFATFNPMKEFVRPVHDAHVHDEF-ERFKVKHQRQYASDLEHEKRLNIFRQSLRY 321
R + +KE + P + VH++F E F++KHQR+ + H + + +F + Y
Sbjct: 236 RQYIELAVLKETLAP-GEIIVHEDFAENFQLKHQREIMAAHWHNEMVTVFTAVVYY 290
>SB_26145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +1
Query: 154 SRHFATFNPMKEFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSN 333
+RH T+N + +R VH + + R+ V + + N Q++RY+H+
Sbjct: 68 TRHVHTYNTTSQAIRHVHTYNTTSQATRY-VHTYNTTSQATRYVHTYNTTSQAIRYVHTY 126
Query: 334 NRANR 348
N ++
Sbjct: 127 NTTSQ 131
>SB_59160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = +1
Query: 154 SRHFATFNPMKEFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSN 333
+RH T+N + R VH + + R+ V + + N Q++RY+H+
Sbjct: 16 TRHVHTYNTTSQATRHVHTCNTTSQATRY-VHTYNTTSQATRYVHTYNTTSQAIRYVHTY 74
Query: 334 NRANR 348
N ++
Sbjct: 75 NTTSK 79
>SB_28625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 157 RHFATFNPMKEFVRPVHDAHVHDEF-ERFKVKHQRQYASDLEHEKRLNIF 303
R + +KE + P + VH++F E F++KHQR+ + H + + +F
Sbjct: 336 RQYIKLAVLKETLAP-GEIIVHEDFAENFQLKHQREIIAAHWHNEMVTVF 384
>SB_54595| Best HMM Match : Sec7 (HMM E-Value=7.7e-09)
Length = 918
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 549 LIFNGSDRSEQSPVVFRRQLYAQLLHSRFAVRERETVRAGPRVPPPSEGGELVVSAIGEM 370
LIF+ + + + ++ ++L +L+ R E E V ELVVS GE+
Sbjct: 10 LIFHANTEHQNAEYIYNQELVVELVAGREVELELELVVGRGEELVVIREVELVVSRGGEL 69
Query: 369 VHGHG 355
V G G
Sbjct: 70 VFGRG 74
>SB_42932| Best HMM Match : zf-UBR1 (HMM E-Value=7.1)
Length = 271
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 157 RHFATFNPMKEFVRPVHDAHVHDEF-ERFKVKHQRQYASDLEHEKRLNIF 303
R + +KE + P + VH++F E F++KHQR+ + H + + +F
Sbjct: 120 RQYIELAVLKETLAP-GEIIVHEDFAENFQLKHQREIMAAHWHNEMVTVF 168
>SB_59279| Best HMM Match : SURF6 (HMM E-Value=3.5)
Length = 218
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 187 EFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMS- 363
+F+R HD+ + + ++H + S E E+ + +++ + +++RG +
Sbjct: 40 KFLRDKHDSVLEERLRNTAIRHLEEIISTEEQERLIKECKKTGYPSYPERKSSRGRKLKT 99
Query: 364 -----VNHLADRTDDELAALRGRRYSGPSPHGLP 450
+ ++D +D L ++ S +P G+P
Sbjct: 100 KIVGLIESVSDESDTAPETLNPKKSSSLNPVGVP 133
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 494 CLRNTTGDCSERSLPL 541
CL NTTGD ER LPL
Sbjct: 285 CLHNTTGDDCERCLPL 300
>SB_5270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 187 EFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMS- 363
+F+R HD+ + + ++H + S E E+ + +++ + +++RG +
Sbjct: 423 KFLRDKHDSVLEERLRNTAIRHLEEIISTEEQERLIKECKKTGYPSYPERKSSRGRKLKT 482
Query: 364 -----VNHLADRTDDELAALRGRRYSGPSPHGLP 450
+ ++D +D L ++ S +P G+P
Sbjct: 483 KIVGLIESVSDESDTAPETLNPKKSSSLNPVGVP 516
>SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 334 NRANRGFTMSVNHLADRTDDELAALRG 414
NR + + + NH AD TDDE + +G
Sbjct: 2 NRRSLPYKLEPNHFADLTDDEFKSYKG 28
>SB_31271| Best HMM Match : Extensin_2 (HMM E-Value=5.7)
Length = 323
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +1
Query: 154 SRHFATFNPMKEFVRPVHDAHVHDEFERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSN 333
+RH T+N + R VH ++ + RF + + L + N Q+ R++H+
Sbjct: 15 TRHVHTYNTTSKATRHVHTYNITSQATRFVHTYNTTSQASL-YVHTYNTTSQATRHVHTY 73
Query: 334 NRANR 348
N ++
Sbjct: 74 NTTSQ 78
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 232 ERFKVKHQRQYASDLEHEKRLNIFRQSLRYIHSNNRANRGFTMSVNHLADRTD 390
+++KVK + +A E L +F L + NR++ GF M N + D +D
Sbjct: 2132 KKYKVKESKMFAFAREVSLYL-LFLTLLTIVCYGNRSSHGFQMKTNVVNDYSD 2183
>SB_15979| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 367
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = +1
Query: 271 DLEHEKRLNIFRQ---SLRYIHSNNRANR 348
D+E + LN+F+Q +L+YIH+NN +R
Sbjct: 123 DMEEKDILNMFQQMLSALKYIHNNNILHR 151
>SB_14739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 379 DRTDDELAALRGRRYSGPSPHGLPFPYSKSRVEELSVKLPPEHDWRLFGAVTPVKDQSV 555
D+TDD L Y+G SP L +++ V + PE D +L + DQ+V
Sbjct: 4 DQTDDHLKYTFHEVYNGNSPRCLLAKVESLTIDDQIVTITPEEDIKL-SRIANGDDQTV 61
>SB_10159| Best HMM Match : Apo-VLDL-II (HMM E-Value=2)
Length = 638
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 351 TAVRSIIRMYVPERLPEDVQPLLVLQVARVLPLVFDFETL 232
T + +I+ +P+R E P L+ V+++L V DF L
Sbjct: 206 TLIGDVIKHMLPDRAFEQFYPQLLSIVSKILDNVHDFSVL 245
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,408,622
Number of Sequences: 59808
Number of extensions: 331475
Number of successful extensions: 1230
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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