Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31112
(616 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 28 0.072
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 28 0.072
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 28 0.072
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 28 0.072
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 3.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 3.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.7
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 8.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 8.2
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 8.2
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 8.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 8.2
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 8.2
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.072
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 536 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 423
IFL+ S F+ + F C+ P + Y+ + P+ Y
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMY 1043
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.072
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 536 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 423
IFL+ S F+ + F C+ P + Y+ + P+ Y
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMY 1043
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.072
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 536 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 423
IFL+ S F+ + F C+ P + Y+ + P+ Y
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMY 1043
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 27.9 bits (59), Expect = 0.072
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 536 IFLLEPLHSIFLCEAVGKSHFSCLTPSVCYVETWPAKY 423
IFL+ S F+ + F C+ P + Y+ + P+ Y
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMY 1043
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 467 LTPSVCYVETWPAKYDVKVQSINSN*GIVLD 375
LT +VC+V A + K SIN N + LD
Sbjct: 190 LTNAVCFVPGVVAMFSRKPCSINENLKMGLD 220
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 467 LTPSVCYVETWPAKYDVKVQSINSN*GIVLD 375
LT +VC+V A + K SIN N + LD
Sbjct: 190 LTNAVCFVPGVVAMFSRKPCSINENLKMGLD 220
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 4.7
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 178 ENTGCCPVSCSNTLAARVSLSPDSP 104
ENT C P + S + + PD P
Sbjct: 2280 ENTECHPDASSTMAPSTTPMVPDKP 2304
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 342 QNYPWRRSCHAA 307
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 342 QNYPWRRSCHAA 307
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 441 FNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 533
FN RR+ ++ RLT+ WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 441 FNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 533
FN RR+ ++ RLT+ WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 8.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = -2
Query: 342 QNYPWRRSCHAA 307
Q YPW R H A
Sbjct: 209 QIYPWMRKVHVA 220
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 441 FNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 533
FN RR+ ++ RLT+ WFQ +
Sbjct: 204 FNKYLTRRRRIEIAESLRLTERQIKIWFQNR 234
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,146
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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