BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= epV31111 (703 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q8NKN5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2 UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 34 2.9 UniRef50_Q54GS4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9 UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 33 6.8 >UniRef50_Q8NKN5 Cluster: Putative uncharacterized protein; n=1; uncultured crenarchaeote|Rep: Putative uncharacterized protein - uncultured crenarchaeote Length = 105 Score = 34.7 bits (76), Expect = 2.2 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = -3 Query: 395 SFSNSCLGDRMICPKKLITRSRQMEESLFRMFSCLRMNSFVLMASVMRSLTNY 237 S SN ++ I KK I ++ + ++ L R FS ++ N+F M S ++ TNY Sbjct: 6 SMSNENEENKDIDFKKSIEKAAEFQQDLLRQFSTIQYNAFQNMFSSLQGFTNY 58 >UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclease-reverse transcriptase, partial; n=7; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to endonuclease-reverse transcriptase, partial - Strongylocentrotus purpuratus Length = 787 Score = 34.3 bits (75), Expect = 2.9 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 277 NEFILRQLNIRKRLSSICRERVMSFFGHIMRSPRHEL 387 NE I ++LNI + +R + +FGH++R P H L Sbjct: 425 NEEIRQRLNIPSTICEEITKRCLKWFGHVLRMPHHRL 461 >UniRef50_Q54GS4 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 972 Score = 33.9 bits (74), Expect = 3.9 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 26 YGHKKWHIFKTRRFRNYKHFYLTYIKMIR-DKFKFNVSKSL*CIKMENGQFLWDLFWYVN 202 YG+ IF F+N +L +I + R D+FK S ++ Q LW F+YV Sbjct: 648 YGYLVEDIFNRSNFKNMSKIHLNHIFVNRRDQFKLAYQNS------DDSQ-LWFFFFYVA 700 Query: 203 YAIFIFCSSDFS 238 ++ F C + FS Sbjct: 701 FSQFTQCKNSFS 712 >UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse transcriptase-like; n=6; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to reverse transcriptase-like - Strongylocentrotus purpuratus Length = 415 Score = 33.1 bits (72), Expect = 6.8 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 271 RTNEFILRQLNIRKRLSSICRERVMSFFGHIMRSPRHELEKLIITGRI*GK 423 RTN +L++LN + L + +FGHI+R L II ++ GK Sbjct: 308 RTNLSVLQELNTERDLLGKVARLKLGYFGHILRGSGSPLAAQIIESQVEGK 358 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 665,495,551 Number of Sequences: 1657284 Number of extensions: 12782228 Number of successful extensions: 27720 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 26895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27716 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 55785129165 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -