Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31111
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.2  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 13/59 (22%), Positives = 27/59 (45%)
 Frame = +3

Query: 6   CNVTP*TMDIKSGIFLKHDVSETINIFI*RILK*LETSSNLMSVKVYSVLKWRTGSFCG 182
           CN    T  +  G+ +  D  E  N+ +  +LK ++    + + +++S+      S CG
Sbjct: 217 CNEANKTKILLVGLKIDIDQEEERNVVVTSVLKLMQNKLEITACRLFSIDNALLFSICG 275


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 331 GRWKRAFFGCLAALE*TRLFSWPL 260
           G WKRA +  LAA   + L+S P+
Sbjct: 134 GSWKRARYLILAAWFFSALYSLPI 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,115
Number of Sequences: 336
Number of extensions: 3351
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)