BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31111
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein. 24 5.3
AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein. 24 5.3
Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase pr... 23 7.0
>DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein.
Length = 93
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +3
Query: 129 MSVKVYSVLKWRTGSFC---GIC 188
++ K+Y V+K +TG +C G+C
Sbjct: 53 ITCKMYCVIKGKTGGYCNSEGLC 75
>AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein.
Length = 80
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +3
Query: 129 MSVKVYSVLKWRTGSFC---GIC 188
++ K+Y V+K +TG +C G+C
Sbjct: 40 ITCKMYCVIKGKTGGYCNSEGLC 62
>Z49814-1|CAA89968.1| 137|Anopheles gambiae serine proteinase
protein.
Length = 137
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 371 DRMICPKKLITRSRQMEESL 312
D IC K++ T RQM E L
Sbjct: 4 DASICAKRIPTNRRQMPERL 23
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,442
Number of Sequences: 2352
Number of extensions: 13369
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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