Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31111
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 26 0.40
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 23 2.1
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 4.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.9
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 6.5
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 8.6
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.8 bits (54), Expect = 0.40
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 437 IIKKSLPYMRPVIMSFSNSCLGDRMICPKKLIT 339
I +K Y+R + +FS SCL + ++CP +T
Sbjct: 419 IEEKPFVYVREI--AFSESCLPEEILCPHFNVT 449
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -3
Query: 446 PSIIIKKSLPYMRPVIMSFSNSCLGD 369
PS K +L M+P + + C+GD
Sbjct: 19 PSACGKTNLAMMKPTLPGYKIECVGD 44
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 300 KHPKKALFHLPGTCYELLWTYH 365
K+ KK FH LW YH
Sbjct: 95 KNAKKVTFHEMSIPNHYLWLYH 116
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T + H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHDFQHTSSRYSRERSCSRDRNRE 244
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 202 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 233
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 202 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 233
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 6.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 699 SSNSTKSSTCNLTHASAR*VSRRIFSAGRDSD 604
SSNS +S T H S+R R S R+ +
Sbjct: 213 SSNSLRSRTHGFQHTSSRYSRERSCSRDRNRE 244
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 14 DAINYGHKKWHIFKTRRFRNYKHFY 88
D YG + FK FR HF+
Sbjct: 329 DVFRYGLLIYDFFKDSSFRIQHHFF 353
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,521
Number of Sequences: 438
Number of extensions: 3675
Number of successful extensions: 25
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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