Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31108
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   6.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.0  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +2

Query: 485 SINLMFYVRGNKADYDEWAADGNEGWSFEEVLPYFKKSESFMGKFDAEATKYHSKGGYLS 664
           SIN +     +KAD   +A     G++    LP    S S +G     +  YH+  G  S
Sbjct: 371 SINRLLPTAESKADIKMYADMHQYGYNTLSPLPSSVHSHSTIGNDYYNSPLYHTSAGTTS 430

Query: 665 V 667
           +
Sbjct: 431 L 431


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/40 (22%), Positives = 16/40 (40%)
 Frame = +2

Query: 446  CAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWS 565
            C WP      G+S++N++  V   K      +      W+
Sbjct: 1320 CDWPEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWN 1359


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 575 LPRNSSLRFHRQPIRRNRPCYPE 507
           LP+ S+   H   + RN   YP+
Sbjct: 81  LPKESNAIIHIYDVHRNADIYPD 103


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 721 YCSLDYQIFDFVHIIVRSYTEI 656
           Y +LDY     V I+  S TE+
Sbjct: 494 YLNLDYNDLSAVPIVTHSLTEL 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,780
Number of Sequences: 336
Number of extensions: 3655
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)