Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31108
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 93 7e-19
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 79 2e-14
BC104931-1|AAI04932.1| 161|Homo sapiens interleukin 25 protein. 32 1.9
BC104929-1|AAI04930.1| 161|Homo sapiens interleukin 25 protein. 32 1.9
BC069565-1|AAH69565.1| 177|Homo sapiens interleukin 25 protein. 32 1.9
AY359127-1|AAQ89484.1| 177|Homo sapiens IL17E protein. 32 1.9
AF461739-1|AAN39038.1| 161|Homo sapiens interleukin 17E protein. 32 1.9
AF458059-1|AAL57622.1| 161|Homo sapiens IL25 protein. 32 1.9
AF305200-1|AAG40848.1| 177|Homo sapiens interleukin 17E protein. 32 1.9
D31897-1|BAA06695.1| 400|Homo sapiens Doc2 protein. 31 3.3
BC063436-1|AAH63436.1| 400|Homo sapiens DOC2A protein protein. 31 3.3
BC055284-1|AAH55284.1| 400|Homo sapiens double C2-like domains,... 31 3.3
BC041769-1|AAH41769.2| 400|Homo sapiens DOC2A protein protein. 31 3.3
BC119640-1|AAI19641.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 5.8
BC119639-1|AAI19640.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 5.8
AF141315-1|AAD48406.1| 340|Homo sapiens alpha-1,4-N-acetylgluco... 31 5.8
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 93.5 bits (222), Expect = 7e-19
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 9/178 (5%)
Frame = +2
Query: 224 YDFIXXXXXXXXXXXXNRLSEISDWKVLLVEAG------GNPTLATEIPQPYYSNMGTSE 385
Y ++ RL+E +VLL+EAG G+ L+ +I P +
Sbjct: 41 YSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCD 100
Query: 386 D---WAYHTEPQEGACRAYKNKGCAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNE 556
D W YHTE Q G + WPRG+V GGSSS+N M YVRG+ DY+ W G
Sbjct: 101 DRYNWCYHTEVQRGL----DGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGAR 156
Query: 557 GWSFEEVLPYFKKSESFMGKFDAEATKYHSKGGYLSVASDDNMHEIEDLIIKAAVELG 730
GW + LPYF+K++ + A++Y G L V+ H + ++A + G
Sbjct: 157 GWDYAHCLPYFRKAQG----HELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAG 210
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 78.6 bits (185), Expect = 2e-14
Identities = 35/93 (37%), Positives = 51/93 (54%)
Frame = +2
Query: 452 WPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEEVLPYFKKSESFMGKFDAEA 631
WPRG+V GGSSS+N M YVRG+ DY+ W G GW + LPYF+K++ + A
Sbjct: 10 WPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQG----HELGA 65
Query: 632 TKYHSKGGYLSVASDDNMHEIEDLIIKAAVELG 730
++Y G L V+ H + ++A + G
Sbjct: 66 SRYRGADGPLRVSRGKTNHPLHCAFLEATQQAG 98
>BC104931-1|AAI04932.1| 161|Homo sapiens interleukin 25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>BC104929-1|AAI04930.1| 161|Homo sapiens interleukin 25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>BC069565-1|AAH69565.1| 177|Homo sapiens interleukin 25 protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>AY359127-1|AAQ89484.1| 177|Homo sapiens IL17E protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>AF461739-1|AAN39038.1| 161|Homo sapiens interleukin 17E protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>AF458059-1|AAL57622.1| 161|Homo sapiens IL25 protein.
Length = 161
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 110 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 154
>AF305200-1|AAG40848.1| 177|Homo sapiens interleukin 17E protein.
Length = 177
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 572 PR-NSSLRFHRQPIRRNRPCYPERKTSN*CCCFRRAPYHVAKRIPCFC 432
PR NS L +H Q + RPC+ E+ T C RR Y V+ + C C
Sbjct: 126 PRGNSELLYHNQTVFYRRPCHGEKGTHKGYCLERRL-YRVS--LACVC 170
>D31897-1|BAA06695.1| 400|Homo sapiens Doc2 protein.
Length = 400
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 163 RTLRSQECSQGLLEDRPRYLVAVDYSSR*R----WVARPKHLEAL 41
+ L E QGLLE+R R L+++ YSSR R + R HL A+
Sbjct: 237 KDLEQAEQGQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAM 281
>BC063436-1|AAH63436.1| 400|Homo sapiens DOC2A protein protein.
Length = 400
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 163 RTLRSQECSQGLLEDRPRYLVAVDYSSR*R----WVARPKHLEAL 41
+ L E QGLLE+R R L+++ YSSR R + R HL A+
Sbjct: 237 KELEQAEQGQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAM 281
>BC055284-1|AAH55284.1| 400|Homo sapiens double C2-like domains,
alpha protein.
Length = 400
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 163 RTLRSQECSQGLLEDRPRYLVAVDYSSR*R----WVARPKHLEAL 41
+ L E QGLLE+R R L+++ YSSR R + R HL A+
Sbjct: 237 KELEQAEQGQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAM 281
>BC041769-1|AAH41769.2| 400|Homo sapiens DOC2A protein protein.
Length = 400
Score = 31.5 bits (68), Expect = 3.3
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -1
Query: 163 RTLRSQECSQGLLEDRPRYLVAVDYSSR*R----WVARPKHLEAL 41
+ L E QGLLE+R R L+++ YSSR R + R HL A+
Sbjct: 237 KELEQAEQGQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAM 281
>BC119640-1|AAI19641.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 399 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 494
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
>BC119639-1|AAI19640.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 399 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 494
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
>AF141315-1|AAD48406.1| 340|Homo sapiens
alpha-1,4-N-acetylglucosaminyltransferase protein.
Length = 340
Score = 30.7 bits (66), Expect = 5.8
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 399 ILNHRKGLV-VPTKTRDALGHVVRCSAEAAASI 494
+L+HR+G+V + T R H+V CS E+AA I
Sbjct: 45 LLSHRRGIVFLETSERMEPPHLVSCSVESAAKI 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,110,447
Number of Sequences: 237096
Number of extensions: 2309293
Number of successful extensions: 8410
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8409
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -