Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31108
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    89   4e-18
U64600-1|AAK39203.1|  500|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical...    28   6.2  
AF036693-10|AAK29789.1|  572|Caenorhabditis elegans Hypothetical...    28   6.2  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
 Frame = +2

Query: 272 NRLSEISDWKVLLVEAGG-NPTLATEIPQP---YYSNMGTSEDWAYHTEPQEGACRAYKN 439
           NRL+E    +VLL+EAG  +      I  P    Y+    + +W YHT  Q+       N
Sbjct: 54  NRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKNL----GN 109

Query: 440 KGCAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEEVLPYFKKSESF 607
           +   WPRG+V GGSS++N M YVRG+  DY+ W  +G  GW++   LPYFKK+E++
Sbjct: 110 RVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYFKKAETY 165


>U64600-1|AAK39203.1|  500|Caenorhabditis elegans Hypothetical
           protein C33D12.2 protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
 Frame = -1

Query: 694 DFVHIIVRSYTEITAFAVVFSRLRVKFTHEAFTF-LKVGQDFLETPAFVSIGSPFVVIGL 518
           D  H     ++ +T   VV      K T    +F L V + F   P FV +  PF ++  
Sbjct: 71  DLAHFFEADFSSMTPIRVVVEMSFPKTTESKDSFKLCVSEKFYANPQFVIVEDPFTMVTT 130

Query: 517 VTPNV 503
             P V
Sbjct: 131 EIPPV 135


>AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical
           protein F49F1.11 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 368 NMGTSEDWAYH--TEPQEGACRAYKNKGCAWPRGKVLGGS 481
           N+  S+ W +H  +EP +G     ++   AW  G+  GG+
Sbjct: 129 NLAKSKVWVFHFASEPTKGLVARTRHTNGAWEVGETYGGN 168


>AF036693-10|AAK29789.1|  572|Caenorhabditis elegans Hypothetical
           protein C49A9.2 protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
 Frame = +2

Query: 401 TEPQEGACRAYKNKGCAWPRG-KVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEEV 577
           TE ++      K +G   P+  K  G   ++ +    +GN  DY  W  D      F   
Sbjct: 397 TENKKKVTEKVKERGIRRPQDPKSKGIQRAVVIRVIEKGNSTDYIVWNLDSKMECIFRSA 456

Query: 578 LPYFKKSESFMGKF 619
               ++   F GKF
Sbjct: 457 KHELERGHFFSGKF 470


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,932
Number of Sequences: 27780
Number of extensions: 341050
Number of successful extensions: 932
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)