Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31106
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              39   3e-05
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               26   0.31 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.0  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +3

Query: 36  VLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKK-LGDPSGLN-S 209
           + AFC   VG+ A++EE   ++ K    + + C++E  ++    D  KK + D +    +
Sbjct: 7   IFAFCL--VGILAVSEESINKLRK----IESVCAEENGIDLKKADDVKKGIFDKNDEKLA 60

Query: 210 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEE 317
           C+V C +KK G +NA   F+     E++ K L SE+
Sbjct: 61  CYVDCMLKKVGFVNADTTFNEEKFRERTTK-LDSEQ 95



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +1

Query: 364 NDKPVSDSDKGCERAKLLLDCFVAN 438
           N K +++S+  C+++  LL CF+ N
Sbjct: 102 NCKDITESNS-CKKSSKLLQCFIDN 125


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 129 ECSKEFSVNQGDIDAAKKLGDPSGLNS---CFVGCFMKKAGIINASGLFDVAATIEKSKK 299
           +C KE  V+   +   K  GD    +    C++ CFM K GI++ +   DV   +    +
Sbjct: 28  DCRKESKVSWAALKKMKA-GDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPR 86

Query: 300 YLTSEEDLKAFEK 338
            +  +   K F K
Sbjct: 87  SM-QDSTKKLFNK 98


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 238 LESSTQVVFSM*PLLLRRARNILP 309
           L+S+ +VV  +  + L  A+NILP
Sbjct: 32  LDSNVEVVVGVPSIYLTYAKNILP 55


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 456 DRETSFVCNETVEEKFCSFAAL 391
           D+ T F     VEE  C F+A+
Sbjct: 452 DKSTEFFLATVVEEAACRFSAV 473


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 413 FSSTVSLQTKEVSRSSHFKEQSL*CFNNYLIISKQSFFYC 532
           F  T+  +T+ + R S    +S  C N+     + S F C
Sbjct: 339 FKQTICCKTRIIGRRSWVTRESQICNNSSSDKERNSSFKC 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,899
Number of Sequences: 438
Number of extensions: 3098
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)