Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31104
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.9  
EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.     23   7.7  
EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     23   7.7  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 500 AAARPACLARFPDSRCYQENRQA 432
           A+  P CL    D+RCYQ  ++A
Sbjct: 855 ASMIPICLLVQEDARCYQRQQEA 877


>EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 207 CLYPASIAQYTAWRTSSIESDSLAVPRPVP 118
           CLY   + +YT    S+++ D   V + VP
Sbjct: 25  CLYCLKVFKYTKGTNSNLKRDLNLVHKTVP 54


>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 207 CLYPASIAQYTAWRTSSIESDSLAVPRPVP 118
           CLY   + +YT    S+++ D   V + VP
Sbjct: 25  CLYCLKVFKYTKGTNSNLKRDLNLVHKTVP 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,221
Number of Sequences: 2352
Number of extensions: 12568
Number of successful extensions: 241
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)