Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31103
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z34801-5|CAA84326.1| 123|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z93380-2|CAB07596.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine re... 30 1.7
AF016415-9|AAW88416.1| 297|Caenorhabditis elegans Serpentine re... 29 3.9
Z93383-13|CAI58636.1| 206|Caenorhabditis elegans Hypothetical p... 28 5.2
Z93383-12|CAB07628.2| 283|Caenorhabditis elegans Hypothetical p... 28 5.2
AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 28 6.8
U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical p... 28 6.8
U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical p... 28 6.8
U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +2
Query: 263 PAMPEHTPAPTPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTAL 442
P+ H P P P+R +YGF LY+ S T ++ IWA TP L+ I Y P K W+ A+
Sbjct: 19 PSEEIHLPGPHPARGIYGFALYIVSWTLFVIYLIWAITPVPILYRLGITYIPSKLWALAI 78
Query: 443 PIQFLVALTVF 475
I F A ++
Sbjct: 79 GIFFPTAACLY 89
>Z34801-5|CAA84326.1| 123|Caenorhabditis elegans Hypothetical
protein F59A2.5 protein.
Length = 123
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +2
Query: 14 YYLQKTLKFSFTSNDNASLVYDVLNVDKELKGSGVHREFQLKSNVLYIEFKSLDLKRLRV 193
Y +++ S + + A V DV+ +DKE + SG RE + + I+ +S D K L
Sbjct: 24 YIHSASVRLSVGTEEAARTVADVIKIDKEPRRSGARREVCSEGEFVVIKIESKDPKSLSK 83
Query: 194 AVNAILKNILLITKTVE 244
++ + I L KT++
Sbjct: 84 SIANAVDMIDLSVKTIK 100
>Z93380-2|CAB07596.1| 340|Caenorhabditis elegans Hypothetical
protein F28C12.2 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 FFLYLFSKTT-LTMFCIWAFTPDSFL-HYFNIYYYPQKYWSTALPIQFLVALTVFAFLI 487
F LYL+ T + + +++ T D + HY + YY+ +Y+ + + LT+F+F I
Sbjct: 110 FELYLYYPTGYFSTYSVFSLTFDRLISHYKSRYYHMHQYFIATSLLVLQLLLTMFSFYI 168
>AF016415-7|AAW88412.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 33 protein.
Length = 296
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 300 QDLYMASFCTYLAKQP*QCFVFGLLHQIVFYIILTFITIHKN 425
+++++ FC Y P C VFG FY +F TIHK+
Sbjct: 140 EEIWLFKFCDYKLDIPSNCKVFGCAVNSCFY---SFWTIHKS 178
>AF016415-9|AAW88416.1| 297|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 36 protein.
Length = 297
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 311 YGFFLYLFSKTTLTMFCIWAF----TPDSFLHYFNIYYYPQKYWSTALPIQFLVALTV 472
Y F L +F T L ++ ++ PD L Y ++ Y WS + ++ALT+
Sbjct: 46 YRFTLDIFFGTCLLLYIVFILLSMEAPDFMLQYRSLIVYLALPWSNVAACRSIIALTI 103
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 300 QDLYMASFCTYLAKQP*QCFVFGLLHQIVFYIILTFITIHKN 425
++L + FC+Y + P C VFG FY F TIH++
Sbjct: 140 EELTLFGFCSYDMEIPSTCRVFGCAMNKCFY---NFWTIHRS 178
>Z93383-13|CAI58636.1| 206|Caenorhabditis elegans Hypothetical
protein F54B8.7b protein.
Length = 206
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 317 FFLYLFSKTTLTMFCIWAFT----PDSFLHYFNIYYYPQKYWSTALPIQFLVALTVFAFL 484
++ Y ++ + F I A T F+ Y K+ S A + L +LT+F F
Sbjct: 91 YYNYYLTQEQIVHFVIGAMTVILCARLFIMYLTAKSEVTKFLSQATRVALLDSLTIFTFF 150
Query: 485 IYPSINMILTPHID 526
I PS P D
Sbjct: 151 ILPSFAYAQFPATD 164
>Z93383-12|CAB07628.2| 283|Caenorhabditis elegans Hypothetical
protein F54B8.7a protein.
Length = 283
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 317 FFLYLFSKTTLTMFCIWAFT----PDSFLHYFNIYYYPQKYWSTALPIQFLVALTVFAFL 484
++ Y ++ + F I A T F+ Y K+ S A + L +LT+F F
Sbjct: 168 YYNYYLTQEQIVHFVIGAMTVILCARLFIMYLTAKSEVTKFLSQATRVALLDSLTIFTFF 227
Query: 485 IYPSINMILTPHID 526
I PS P D
Sbjct: 228 ILPSFAYAQFPATD 241
>AL031632-1|CAA21004.1| 248|Caenorhabditis elegans Hypothetical
protein Y32B12B.1 protein.
Length = 248
Score = 28.3 bits (60), Expect = 5.2
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 298 WCRCWCVFRHCWLF 257
+CRC CV+R WLF
Sbjct: 14 FCRCLCVYRCLWLF 27
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 431 STALPIQFLVALTVFAFLIYPSINMILTPHI 523
+TA P FLVAL+ FA IY +LTP I
Sbjct: 570 NTASP--FLVALSTFATFIYIDPKNVLTPEI 598
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 431 STALPIQFLVALTVFAFLIYPSINMILTPHI 523
+TA P FLVAL+ FA IY +LTP I
Sbjct: 570 NTASP--FLVALSTFATFIYIDPKNVLTPEI 598
>U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical
protein C34D4.4b protein.
Length = 205
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 293 TPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALTV 472
T S++ GF L +F K T+ + + SF +Y+ +++ + +QFLV LT+
Sbjct: 15 TQSQTSQGFSLQMFGKPTIVLAHL------SFKGAALFFYFFANFFTNSFIVQFLVILTL 68
Query: 473 FA 478
+
Sbjct: 69 LS 70
>U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical
protein C34D4.4a protein.
Length = 247
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 293 TPSRSLYGFFLYLFSKTTLTMFCIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALTV 472
T S++ GF L +F K T+ + + SF +Y+ +++ + +QFLV LT+
Sbjct: 57 TQSQTSQGFSLQMFGKPTIVLAHL------SFKGAALFFYFFANFFTNSFIVQFLVILTL 110
Query: 473 FA 478
+
Sbjct: 111 LS 112
>U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical
protein F41C3.8a protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +2
Query: 347 LTMFCIWAFTPDSFLHY----FNIYYY-PQKYWSTALP-IQFLVALTVFAFLI 487
L + C+W + +F+H+ F +Y P YWS FL+ V FL+
Sbjct: 244 LILGCVWVYGSKAFVHFNEGMFERHYCDPTIYWSAFFACTAFLIFYCVIIFLV 296
>U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical
protein F41C3.8b protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Frame = +2
Query: 347 LTMFCIWAFTPDSFLHY----FNIYYY-PQKYWSTALP-IQFLVALTVFAFLI 487
L + C+W + +F+H+ F +Y P YWS FL+ V FL+
Sbjct: 276 LILGCVWVYGSKAFVHFNEGMFERHYCDPTIYWSAFFACTAFLIFYCVIIFLV 328
>Z81102-2|CAB03203.1| 313|Caenorhabditis elegans Hypothetical
protein M02B1.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +2
Query: 326 YLFSKTTLTMF------CIWAFTPDSFLHYFNIYYYPQKYWSTALPIQFLVALT 469
YLF K LT++ +WAF +F NI+Y Y + + LV LT
Sbjct: 140 YLFKKDKLTLYEYRVSMIVWAFLCGTFSTISNIHYALSDYGAPNYFMPVLVGLT 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,187,510
Number of Sequences: 27780
Number of extensions: 331113
Number of successful extensions: 942
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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