Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31102
(427 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 267 2e-72
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 266 6e-72
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 266 6e-72
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 266 6e-72
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 266 6e-72
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 266 6e-72
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 266 6e-72
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 266 6e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 255 1e-68
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 227 3e-60
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 187 3e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 181 2e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 172 8e-44
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 144 3e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 118 1e-27
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 1e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 6e-06
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.26
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.80
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 3.2
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.4
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 26 9.8
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 26 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 267 bits (655), Expect = 2e-72
Identities = 120/122 (98%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 118/122 (96%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 266 bits (651), Expect = 6e-72
Identities = 119/122 (97%), Positives = 122/122 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 419
SKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 420 TQ 425
TQ
Sbjct: 121 TQ 122
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 255 bits (624), Expect = 1e-68
Identities = 112/120 (93%), Positives = 120/120 (100%)
Frame = +3
Query: 66 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 245
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 246 RGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 425
RG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 227 bits (554), Expect = 3e-60
Identities = 101/104 (97%), Positives = 104/104 (100%)
Frame = +3
Query: 114 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGMLTLKYPIEHGIIT 293
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG+LTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 294 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 425
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 108
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 187 bits (455), Expect = 3e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKI 317
SKRG+LTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKI 317
SKRG+LTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDMEKI 317
SKRG+LTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 181 bits (441), Expect = 2e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGMLTLKYPIEHGIITNWDDM 308
SKRG+LTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 172 bits (419), Expect = 8e-44
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = +3
Query: 192 MVGMGQKDSYVGDEAQSKRGMLTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 371
MVGMGQKDSYVGDEAQSKRG+LTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 372 LLTEAPLNPKANREKMTQ 425
LLTEAPLNPKANREKMTQ
Sbjct: 61 LLTEAPLNPKANREKMTQ 78
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 144 bits (348), Expect = 3e-35
Identities = 64/124 (51%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Frame = +3
Query: 66 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 236
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 237 QSKRGMLTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 413
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 414 KMTQ 425
+ +
Sbjct: 122 RSAE 125
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 118 bits (285), Expect = 1e-27
Identities = 59/117 (50%), Positives = 78/117 (66%), Gaps = 3/117 (2%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGML 257
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R ML
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 258 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQ 425
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQ 125
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.3 bits (219), Expect = 1e-19
Identities = 52/131 (39%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Frame = +3
Query: 60 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 203
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 204 GQKDSYVGDEAQSKRGM-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 380
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 381 EAPLNPKANRE 413
E PLN NRE
Sbjct: 121 EPPLNTPENRE 131
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 62.1 bits (144), Expect = 2e-10
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Frame = +3
Query: 69 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 242
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 243 KR------GMLTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 377
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 378 TEAPLNPKANREKMTQ 425
+E+ N +A REK+T+
Sbjct: 129 SESSWNDRARREKLTE 144
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 75 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGM 254
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 255 LTLKYPIEHGIITNWDDMEKIWHHTF 332
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 75 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGM 254
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 255 LTLKYPIEHGIITNWDDMEKIWHHTF 332
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.26
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 91 STMAPACARPVSPATTRPAPSSRP 162
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.80
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1
Query: 82 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 189
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 205 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 95
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 114 KAGFAGDDAPRAVFPSIVGRPRHQG 188
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 91 STMAPACARPVSPATTRPAPSSRPSWVALATRA 189
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 294 NWDDMEKIWHHTFYNE--LRVAPEEHPV 371
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 26.6 bits (56), Expect = 7.4
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = -3
Query: 344 QLIVEGVVPDLLHVI------PVGDDPVLD--GVLQSEHTSLALGLVTHVGVFLAHTDHH 189
+L+ EGV P L + PVG + D G+ +EH + LG V D
Sbjct: 551 RLLQEGVEPSELDKLTTKFGFPVGAATLADEAGLDVAEHVARYLGTALGPRVHGGSVDLL 610
Query: 188 ALVARATHDGREDGAGRVVAGE 123
+ + RA H GR+ G V G+
Sbjct: 611 SELVRAGHKGRKTSKGIFVYGD 632
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 267 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 368
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 26.6 bits (56), Expect = 7.4
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 267 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 368
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 168 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGMLTLKYPIEHGIITNWDDMEKIWHHTF 332
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 168 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGMLTLKYPIEHGIITNWDDMEKIWHHTF 332
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 285 IITNWDDMEKIWHHTFYNELRVAPE 359
++ NWD EK W TF+ L+ E
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCIRE 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,913,461
Number of Sequences: 27780
Number of extensions: 224007
Number of successful extensions: 1065
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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