Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31100
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 441 LLISSLFNGCYYTYKPSYLITLSIKKKTHQ 352
           LL   L + C Y + P Y +   + ++ H+
Sbjct: 221 LLRCWLISKCIYVFNPRYYLEKKVTRRLHR 250


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 441 LLISSLFNGCYYTYKPSYLITLSIKKKTHQ 352
           LL   L + C Y + P Y +   + ++ H+
Sbjct: 221 LLRCWLISKCIYVFNPRYYLEKKVTRRLHR 250


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 13  INFIIVFLKITPL--LINV*MTSMCPSILAITSFKWKHC*PCGLM 141
           I FI   L  +P+  +I V +TS+C  ++ + S  ++    CG+M
Sbjct: 489 IYFISKTLAESPIFIIIPVTLTSVCYFMIGLNSHGFRFYIACGIM 533


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 523 YKLYTHYLSIFYTV 564
           Y+   HYL +F+TV
Sbjct: 519 YQSLAHYLRVFFTV 532


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +1

Query: 13  INFIIVFLKITPL--LINV*MTSMCPSILAITSFKWKHC*PCGLM 141
           I FI   L  +P+  +I V +TS+C  ++ + S  ++    CG+M
Sbjct: 489 IYFISKTLAESPIFIIIPVILTSVCYFMIGLNSQGFRFYIACGIM 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,989
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)