Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31100
         (706 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0431 - 9327167-9327226,9327347-9327474,9327594-9327709,932...    29   2.7  
01_01_0761 - 5874953-5876803                                           28   6.3  

>09_02_0431 -
           9327167-9327226,9327347-9327474,9327594-9327709,
           9327816-9327895,9328787-9328912,9329676-9329856,
           9330514-9330578,9330655-9330915
          Length = 338

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 453 NCNLLLISSLFNGCYYTYKP 394
           NCNL++I  LF   Y+ YKP
Sbjct: 304 NCNLVIIDFLFRHGYHVYKP 323


>01_01_0761 - 5874953-5876803
          Length = 616

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 474 PPPLRFGNCNLLLISSLFNGCYYTYKP 394
           PPP  FG C+ LL+S  F G  YT  P
Sbjct: 68  PPPGSFGPCSTLLLSHSF-GFTYTLPP 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,679,687
Number of Sequences: 37544
Number of extensions: 250835
Number of successful extensions: 401
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)