Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31100
         (706 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)                  29   2.8  
SB_52932| Best HMM Match : Ank (HMM E-Value=0)                         28   8.5  
SB_10243| Best HMM Match : Ank (HMM E-Value=0)                         28   8.5  

>SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)
          Length = 1089

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 559 YKIYLNNACIIYKYNHYIILHYFIKYLRPAPASLRKL 449
           Y +YLN  C++Y Y + II+HY     +  P S  +L
Sbjct: 691 YGLYLN-VCMLYAYFNIIIIHYVSLVRQQGPNSRLRL 726


>SB_52932| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1266

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 104 LVIASIDGHIDVIHTLINNGVIFRNT 27
           L+IA+ +GH DV+ TL+N G     T
Sbjct: 831 LIIAAQEGHSDVVITLLNFGTPINQT 856


>SB_10243| Best HMM Match : Ank (HMM E-Value=0)
          Length = 475

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 104 LVIASIDGHIDVIHTLINNGVIFRNT 27
           L+IA+ +GH DV+ TL+N G     T
Sbjct: 27  LIIAAQEGHSDVVITLLNFGTPINQT 52


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,037,989
Number of Sequences: 59808
Number of extensions: 330977
Number of successful extensions: 696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)