Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31100
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99270-2|CAB16469.3|  477|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p...    28   7.5  
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.        28   7.5  
AF026209-4|AAW88411.1|  317|Caenorhabditis elegans Serpentine re...    27   9.9  
AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical...    27   9.9  

>Z99270-2|CAB16469.3|  477|Caenorhabditis elegans Hypothetical
           protein Y37A1A.2 protein.
          Length = 477

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = -2

Query: 390 YLITLSIKKKTHQNPLRSLKDLSIHRERYRDRESDFVLYYVVIK*ISRNNYIYETRLCIC 211
           +L+  S+  +  Q P   L +L I   RY      F+L +         + I   ++ + 
Sbjct: 338 FLVYCSVPNQATQRPTSDLANLWITPSRYLSMIIGFLLGFADFTITMTRSVI--CQIAVP 395

Query: 210 IFRSDEFSSNRSYE--TTCKILF 148
            FR++ FS  R Y+   +C ILF
Sbjct: 396 DFRAEIFSLTRIYQCVASCVILF 418


>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
           protein T04A8.14 protein.
          Length = 1521

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -2

Query: 369 KKKTHQNPLRSL--KDLSIHRERYRDRESDFVLYYVVIK*ISRNNYIYETRLCICIFRSD 196
           K+     P+RSL  ++   + +   D   D ++ Y   +    NNY+    L   IF+ D
Sbjct: 607 KRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLVNKYLSDSIFQKD 666

Query: 195 EFSSN 181
           E++ N
Sbjct: 667 EYTEN 671


>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
           protein T04A8.14 protein.
          Length = 1521

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -2

Query: 369 KKKTHQNPLRSL--KDLSIHRERYRDRESDFVLYYVVIK*ISRNNYIYETRLCICIFRSD 196
           K+     P+RSL  ++   + +   D   D ++ Y   +    NNY+    L   IF+ D
Sbjct: 607 KRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLVNKYLSDSIFQKD 666

Query: 195 EFSSN 181
           E++ N
Sbjct: 667 EYTEN 671


>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
          Length = 1521

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -2

Query: 369 KKKTHQNPLRSL--KDLSIHRERYRDRESDFVLYYVVIK*ISRNNYIYETRLCICIFRSD 196
           K+     P+RSL  ++   + +   D   D ++ Y   +    NNY+    L   IF+ D
Sbjct: 607 KRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLVNKYLSDSIFQKD 666

Query: 195 EFSSN 181
           E++ N
Sbjct: 667 EYTEN 671


>AF026209-4|AAW88411.1|  317|Caenorhabditis elegans Serpentine
           receptor, class h protein2, isoform b protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 547 LNNACIIYKYNHYIILHYFI 488
           LN+ CI Y   + I+LHY +
Sbjct: 2   LNSTCIFYDQTYQIVLHYIL 21


>AC024882-15|AAF60936.1|  688|Caenorhabditis elegans Hypothetical
           protein Y9C9A.13 protein.
          Length = 688

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -3

Query: 230 KLDYVYVFFVQMNSRLIVRMKPHAKYCFPFIKPQG*QCF--HLKLVIASIDGHI-DVIHT 60
           K+   +  +++++  L      H KYC   +K  G +    HLK   A++  HI D++  
Sbjct: 477 KISMCFTQYIRISKFLSETTSSHEKYCTCLLKCNGAEMLFEHLKTTGAAVQMHITDILRN 536

Query: 59  L 57
           L
Sbjct: 537 L 537


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,937,265
Number of Sequences: 27780
Number of extensions: 272584
Number of successful extensions: 576
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)